RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 FGFBP2Q9BYJ0 223 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 HSPBP1Q9NZL4 362 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 CIZ1Q9ULV3 898 aaPredicted RBP17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 MAFFQ9ULX9 164 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 POLIQ9UNA4 740 aa17.05■□□□□ 0.32
TSPAN4-201ENST00000346501 REV3LO60673 3130 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 OR6C75A6NL08 312 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 ZNF202O95125 648 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 LRG1P02750 347 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 RPN1P04843 607 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 TYMPP19971 482 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 GUCY2FP51841 1108 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 LILRA4P59901 499 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 EHHADHQ08426 723 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 KMT5BQ4FZB7 885 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 TMEM31Q5JXX7 168 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 OVOS1Q6IE37 1185 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 KRBA2Q6ZNG9 492 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 THEM5Q8N1Q8 247 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 ELMOD1Q8N336 334 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 XXYLT1Q8NBI6 393 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 SLC7A14Q8TBB6 771 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 SCFD1Q8WVM8 642 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 SENP8Q96LD8 212 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 WDR6Q9NNW5 1121 aaKnown RBP17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 AGPAT3Q9NRZ7 376 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 FBXL5Q9UKA1 691 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
TSPAN4-201ENST00000346501 CLUHO75153 1309 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 ANO9A1A5B4 782 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 PIRO00625 290 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 KRT19P08727 400 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 GBP2P32456 591 aaPredicted RBP17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 AARSP49588 968 aaKnown RBP eCLIP17.03■□□□□ 0.328e-6■■■■■ 52.4
TSPAN4-201ENST00000346501 CYP2J2P51589 502 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 ROR1Q01973 937 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 MRPL58Q14197 206 aaKnown RBP17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 DUOXA2Q1HG44 320 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 BMT2Q1RMZ1 405 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 ZDHHC14Q8IZN3 488 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 GLIS3Q8NEA6 775 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 EPHX3Q9H6B9 360 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 CYP4F11Q9HBI6 524 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.03■□□□□ 0.325e-7■■■■□ 26.7
TSPAN4-201ENST00000346501 MUTYHQ9UIF7 546 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 CDH22Q9UJ99 828 aa17.03■□□□□ 0.32
TSPAN4-201ENST00000346501 TCHHQ07283 1943 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 C2CD4DB7Z1M9 353 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 CYB561D2O14569 222 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 ADAM12O43184 909 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 EXOC3O60645 756 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 OAZ2O95190 189 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 ATF2P15336 505 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 IGFBP6P24592 240 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 RBP5P82980 135 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 MYO1EQ12965 1108 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 SNRNP35Q16560 246 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 CSGALNACT2Q8N6G5 542 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 RDH13Q8NBN7 331 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 PDE11AQ9HCR9 933 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 RMND1Q9NWS8 449 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 AFF4Q9UHB7 1163 aaKnown RBP17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 AGAP1Q9UPQ3 857 aa17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 TIMM13Q9Y5L4 95 aaPredicted RBP17.02■□□□□ 0.32
TSPAN4-201ENST00000346501 MTCL1Q9Y4B5 1905 aaKnown RBP17.02■□□□□ 0.31
TSPAN4-201ENST00000346501 PLXNA3P51805 1871 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 SPTBN5Q9NRC6 3674 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 KPNA7A9QM74 516 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 CLIC2O15247 247 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 CALUO43852 315 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 ABLIM3O94929 683 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 ITGB3P05106 788 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 POU2F2P09086 479 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 TNNI1P19237 187 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 MYBPC2Q14324 1141 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 IQCEQ6IPM2 695 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 C12orf56Q8IXR9 622 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 LRRC52Q8N7C0 313 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 GTPBP4Q9BZE4 634 aaKnown RBP17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 ZFP37Q9Y6Q3 630 aaPredicted RBP17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 VWA8A3KMH1 1905 aa17.01■□□□□ 0.31
TSPAN4-201ENST00000346501 BDP1A6H8Y1 2624 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 WDR27A2RRH5 827 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 CCL16O15467 120 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 TGFB1I1O43294 461 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 KLRC4O43908 158 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 TBC1D4O60343 1298 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 GPR37L1O60883 481 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 HUS1O60921 280 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 SMC2O95347 1197 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 FSHRP23945 695 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 POLR2BP30876 1174 aaKnown RBP17■□□□□ 0.31
TSPAN4-201ENST00000346501 ADCY1Q08828 1119 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 BFSP1Q12934 665 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 STK4Q13043 487 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 PLD1Q13393 1074 aa17■□□□□ 0.31
TSPAN4-201ENST00000346501 MTMR3Q13615 1198 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms