RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ZC3H3Q8IXZ2 948 aaKnown RBP12.77□□□□□ -0.37
SNCA-202ENST00000345009 EFCAB13Q8IY85 973 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 LRRC52Q8N7C0 313 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 RABGGTAQ92696 567 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 TCF25Q9BQ70 676 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 PAAF1Q9BRP4 392 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 TTPALQ9BTX7 342 aa12.77□□□□□ -0.37
SNCA-202ENST00000345009 SRRTQ9BXP5 876 aaKnown RBP12.77□□□□□ -0.37
SNCA-202ENST00000345009 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 PIRO00625 290 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 SYN3O14994 580 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 CAVIN2O95810 425 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 CTSAP10619 480 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 GLUD2P49448 558 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 TAF6P49848 677 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 LILRA4P59901 499 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 CETN1Q12798 172 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 BFSP1Q12934 665 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 BIRC3Q13489 604 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 SV2CQ496J9 727 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 FAM171A1Q5VUB5 890 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 MRPL43Q8N983 215 aaKnown RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 HASPINQ8TF76 798 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 MYLIPQ8WY64 445 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 POP1Q99575 1024 aaKnown RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 DUSP9Q99956 384 aaKnown RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 EMILIN2Q9BXX0 1053 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 MTMR12Q9C0I1 747 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNCA-202ENST00000345009 MARCH5Q9NX47 278 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 MAGEC2Q9UBF1 373 aaPredicted RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 DSEQ9UL01 958 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 MTCH2Q9Y6C9 303 aa12.76□□□□□ -0.37
SNCA-202ENST00000345009 PRRC2BQ5JSZ5 2229 aaKnown RBP12.76□□□□□ -0.37
SNCA-202ENST00000345009 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 H7C4K7 107 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 CLSTN1O94985 981 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 ITGB3P05106 788 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 POLR2BP30876 1174 aaKnown RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 ATICP31939 592 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 TYRO3Q06418 890 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 TCERG1LQ5VWI1 586 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 ELMSAN1Q6PJG2 1045 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 ANKS3Q6ZW76 656 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 METTL23Q86XA0 190 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 CEP57Q86XR8 500 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 C1orf127Q8N9H9 656 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 OR5B17Q8NGF7 314 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 CDCA3Q99618 268 aaPredicted RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 OXCT2Q9BYC2 517 aaPredicted RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 GPR62Q9BZJ7 368 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 IMPG2Q9BZV3 1241 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 NSUN3Q9H649 340 aaKnown RBP12.75□□□□□ -0.37
SNCA-202ENST00000345009 TLE6Q9H808 572 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 CACNG4Q9UBN1 327 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 IRAK3Q9Y616 596 aa12.75□□□□□ -0.37
SNCA-202ENST00000345009 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 HUS1O60921 280 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 N4BP1O75113 896 aaKnown RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 ADH1AP07327 375 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 SRGAP2BP0DMP2 458 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ODC1P11926 461 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 P4HA1P13674 534 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 DNAJB1P25685 340 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 GUCY2FP51841 1108 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ERVFC1P60507 584 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 DSG1Q02413 1049 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ADGRE1Q14246 886 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 SGSM1Q2NKQ1 1148 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 DCAF17Q5H9S7 520 aaPredicted RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 PLPP4Q5VZY2 271 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 KRT39Q6A163 491 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 PPFIBP1Q86W92 1011 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ANKRD20A12PQ8NF67 263 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ENOX1Q8TC92 643 aaKnown RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 BCL7CQ8WUZ0 217 aaPredicted RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 RIN2Q8WYP3 895 aaPredicted RBP12.74□□□□□ -0.37
SNCA-202ENST00000345009 BORCS6Q96GS4 357 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 HPDLQ96IR7 371 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 ZBP1Q9H171 429 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 THAP9Q9H5L6 903 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 CHST7Q9NS84 486 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 DPP7Q9UHL4 492 aa12.74□□□□□ -0.37
SNCA-202ENST00000345009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNCA-202ENST00000345009 SYCE3A1L190 88 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms