RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 ARHGAP39Q9C0H5 1083 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 PCDHGC5Q9Y5F6 944 aa13.7□□□□□ -0.22
CLK3-201ENST00000345005 A0A1B0GUA9 196 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 ANKRD62A6NC57 917 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 TSPAN1O60635 241 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 ZMYND10O75800 440 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 TMEM191BP0C7N4 346 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 TMEM253P0C7T8 217 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 STAG3L1P0CL83 205 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 GZMAP12544 262 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 KRT5P13647 590 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 CYP11B1P15538 503 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 PDE6CP51160 858 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 GJA9P57773 515 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 OSTNP61366 133 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 TNNC1P63316 161 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 CUL2Q13617 745 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 KIZQ2M2Z5 673 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 SGSM1Q2NKQ1 1148 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 LRIG3Q6UXM1 1119 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 NOP9Q86U38 636 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 SLC47A2Q86VL8 602 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 SLC20A1Q8WUM9 679 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 CTNNBL1Q8WYA6 563 aaPredicted RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 RIN2Q8WYP3 895 aaPredicted RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 TRIB2Q92519 343 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 CPB2Q96IY4 423 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 FAM49AQ9H0Q0 323 aaPredicted RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 SPC25Q9HBM1 224 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 NOCTQ9UK39 431 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 SCN10AQ9Y5Y9 1956 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 GOLGA6L10A6NI86 522 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 NDUFAB1O14561 156 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 AOC2O75106 756 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 RTN2O75298 545 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 GPR32O75388 356 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 C6orf222P0C671 652 aaPredicted RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 CHRNB2P17787 502 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 NOP14P78316 857 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 TFAMQ00059 246 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 PURAQ00577 322 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 SP3Q02447 781 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 TRPC3Q13507 836 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 IQCKQ8N0W5 287 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 OTUD6BQ8N6M0 293 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 MTMR12Q9C0I1 747 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 ISCUQ9H1K1 167 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 EPN3Q9H201 632 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 ASB7Q9H672 318 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 DMGDHQ9UI17 866 aaKnown RBP13.69□□□□□ -0.22
CLK3-201ENST00000345005 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
CLK3-201ENST00000345005 RALGAPA2Q2PPJ7 1873 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 NCANO14594 1321 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 C17orf102A2RUQ5 167 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 TMCO5BA8MYB1 307 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 PALMO75781 387 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 CXCL8P10145 99 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 CDR2Q01850 454 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 DCAF4L1Q3SXM0 396 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 GNASQ5JWF2 1037 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 SPOPLQ6IQ16 392 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 ZNF677Q86XU0 584 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 NME8Q8N427 588 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 C7orf31Q8N865 590 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 ELMO3Q96BJ8 720 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 CALR3Q96L12 384 aaKnown RBP13.68□□□□□ -0.22
CLK3-201ENST00000345005 MTG1Q9BT17 334 aaPredicted RBP13.68□□□□□ -0.22
CLK3-201ENST00000345005 UPF3AQ9H1J1 476 aaKnown RBP13.68□□□□□ -0.22
CLK3-201ENST00000345005 APOBEC3GQ9HC16 384 aaKnown RBP13.68□□□□□ -0.22
CLK3-201ENST00000345005 DONSONQ9NYP3 566 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 NUB1Q9Y5A7 615 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 PCDHB2Q9Y5E7 798 aa13.68□□□□□ -0.22
CLK3-201ENST00000345005 GRIN2DO15399 1336 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 LACTBL1A8MY62 500 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 SEPT4O43236 478 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 FSBPO95073 299 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 CST3P01034 146 aaPredicted RBP13.67□□□□□ -0.22
CLK3-201ENST00000345005 FTLP02792 175 aaPredicted RBP13.67□□□□□ -0.22
CLK3-201ENST00000345005 PRKCZQ05513 592 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 CUL1Q13616 776 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 RUFY4Q6ZNE9 571 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 CATSPER4Q7RTX7 472 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 TMEM192Q8IY95 271 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 DNAJB3Q8WWF6 145 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 RFFLQ8WZ73 363 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 TAF4BQ92750 862 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 LRRC45Q96CN5 670 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 ACAP3Q96P50 834 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 CNTN6Q9UQ52 1028 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 MEFVO15553 781 aaPredicted RBP13.67□□□□□ -0.22
CLK3-201ENST00000345005 TREHO43280 583 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 MMEP08473 750 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 RARBP10826 455 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 DARSP14868 501 aaKnown RBP13.67□□□□□ -0.22
CLK3-201ENST00000345005 HOXD10P28358 340 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 AXLP30530 894 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 HOXC8P31273 242 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 VEGFBP49765 207 aa13.67□□□□□ -0.22
CLK3-201ENST00000345005 MYL6P60660 151 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms