RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 CDCA3Q99618 268 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 MMRN2Q9H8L6 949 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 CLDND1Q9NY35 253 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SIX4Q9UIU6 781 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SCN1AP35498 2009 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 KPNA7A9QM74 516 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 IKBKBO14920 756 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SPTLC1O15269 473 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 NCK2O43639 380 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 LILRB3O75022 631 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TRIM49P0CI25 452 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TRIM49CP0CI26 452 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 CREMQ03060 361 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 DUSP6Q16828 381 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TPD52L1Q16890 204 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 CCDC40Q4G0X9 1142 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TCERG1LQ5VWI1 586 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 FOXR2Q6PJQ5 311 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 ANKS3Q6ZW76 656 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 ZC3H3Q8IXZ2 948 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 LRRC52Q8N7C0 313 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 PIK3R5Q8WYR1 880 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 KLHL5Q96PQ7 755 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 SRRTQ9BXP5 876 aaKnown RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 PCDHB8Q9UN66 801 aa22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 TIMM13Q9Y5L4 95 aaPredicted RBP22.43■■□□□ 1.18
SMARCB1-202ENST00000344921 M0QZQ0 153 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 FGFR1OPO95684 399 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 ADH1AP07327 375 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 ODC1P11926 461 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 RPL17P18621 184 aaKnown RBP22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 AARSP49588 968 aaKnown RBP eCLIP22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 CLDN10P78369 228 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 SCARA3Q6AZY7 606 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 LLGL2Q6P1M3 1020 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 FILIP1Q7Z7B0 1213 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 GPR65Q8IYL9 337 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 LNX1Q8TBB1 728 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 ARMCX3Q9UH62 379 aaPredicted RBP22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 VWA8A3KMH1 1905 aa22.42■■□□□ 1.18
SMARCB1-202ENST00000344921 ARHGEF37A1IGU5 675 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 FSD2A1L4K1 749 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 CYB561D2O14569 222 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 TEX28O15482 410 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 CST3P01034 146 aaPredicted RBP22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 DCAF17Q5H9S7 520 aaPredicted RBP22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 VARS2Q5ST30 1063 aaKnown RBP22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 CXorf38Q8TB03 319 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 HPDLQ96IR7 371 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 PRUNE2Q8WUY3 3088 aa22.41■■□□□ 1.18
SMARCB1-202ENST00000344921 CLASP2O75122 1294 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 YWHAHQ04917 246 aaPredicted RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 TDRD10Q5VZ19 366 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 PPFIBP1Q86W92 1011 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 CREBRFQ8IUR6 639 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 EFHBQ8N7U6 833 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 PABPC5Q96DU9 382 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 RXFP1Q9HBX9 757 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 METTL14Q9HCE5 456 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 FNIP2Q9P278 1114 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 H7C4K7 107 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 LINC01565O15544 149 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 C4BPAP04003 597 aaKnown RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 GCLMP48507 274 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 NDUFV1P49821 464 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 SKOR2Q2VWA4 1001 aaPredicted RBP22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 SV2AQ7L0J3 742 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 PALB2Q86YC2 1186 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 HLA-CQ95604 372 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 BORCS6Q96GS4 357 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 ANO10Q9NW15 660 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 SNX9Q9Y5X1 595 aa22.4■■□□□ 1.18
SMARCB1-202ENST00000344921 STX10O60499 249 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 HUS1O60921 280 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 SRGAP2BP0DMP2 458 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 ERCC5P28715 1186 aaPredicted RBP22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 RBM10P98175 930 aaKnown RBP22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 ENPEPQ07075 957 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 ADAM15Q13444 863 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 STX1AQ16623 288 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 CTXN3Q4LDR2 81 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 C1orf220Q5T0J3 134 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 ZNF280DQ6N043 979 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 FRMD5Q7Z6J6 570 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 METTL23Q86XA0 190 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 HCFC2Q9Y5Z7 792 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 CDY1Q9Y6F8 540 aa22.39■■□□□ 1.17
SMARCB1-202ENST00000344921 SPDYE4A6NLX3 237 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 GNA14O95837 355 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 PPP3CAQ08209 521 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 NCOA4Q13772 614 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 OVOS1Q6IE37 1185 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 CLSTN3Q9BQT9 956 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 PRDM6Q9NQX0 595 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 MTRRQ9UBK8 725 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 DSEQ9UL01 958 aa22.38■■□□□ 1.17
SMARCB1-202ENST00000344921 CCDC192P0DO97 292 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 TYMPP19971 482 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 OR1D2P34982 312 aa22.37■■□□□ 1.17
SMARCB1-202ENST00000344921 PIK3CAP42336 1068 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms