RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 PLOD1Q02809 727 aaPredicted RBP18.95■□□□□ 0.62
SMC4-201ENST00000344722 DAGLBQ8NCG7 672 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 MTMR8Q96EF0 704 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 TIPINQ9BVW5 301 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 KBTBD4Q9NVX7 518 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 PAK5Q9P286 719 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 AKT3Q9Y243 479 aa18.95■□□□□ 0.62
SMC4-201ENST00000344722 TM9SF1O15321 606 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 PJA2O43164 708 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 SFNP31947 248 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ACTR2P61160 394 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 TLR10Q9BXR5 811 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ZSCAN5CA6NGD5 496 aaPredicted RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 PON1P27169 355 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 RFX5P48382 616 aaPredicted RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 MAP3K10Q02779 954 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 RASA2Q15283 850 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ZFRQ96KR1 1074 aaKnown RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 PPP1R36Q96LQ0 422 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 FSD1LQ9BXM9 530 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 BTBD7Q9P203 1132 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 SNAP23O00161 211 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 RALAP11233 206 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 EIF2AK2P19525 551 aaKnown RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 GPC3P51654 580 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 TRIM28Q13263 835 aaKnown RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 MEA1Q16626 185 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 FAM102AQ5T9C2 384 aaPredicted RBP18.94■□□□□ 0.62
SMC4-201ENST00000344722 CC2D2BQ6DHV5 1058 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ZNF677Q86XU0 584 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 NDUFAF2Q8N183 169 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 FBXL16Q8N461 479 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 RNPEPL1Q9HAU8 725 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ADGRB3O60242 1522 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 BBOX1O75936 387 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 SBK1Q52WX2 424 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 C12orf60Q5U649 245 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 KCTD17Q8N5Z5 321 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 SLC12A6Q9UHW9 1150 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 SLC24A2Q9UI40 661 aa18.94■□□□□ 0.62
SMC4-201ENST00000344722 ATMINO43313 823 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 APRTP07741 180 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 PECAM1P16284 738 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 CAPRIN1Q14444 709 aaKnown RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 EAPPQ56P03 285 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 DCAF15Q66K64 600 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 TMPRSS6Q8IU80 811 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 SEMA4AQ9H3S1 761 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 LIN7AO14910 233 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 ZNF483Q8TF39 744 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 MAGEB5Q9BZ81 275 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 DDIASQ8IXT1 998 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 CLEC4FQ8N1N0 589 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 TTC39CQ8N584 583 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 FAM118BQ9BPY3 351 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 SAR1AQ9NR31 198 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 WDR35Q9P2L0 1181 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 MINPP1Q9UNW1 487 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 NOD1Q9Y239 953 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 KIAA0391O15091 583 aaKnown RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 PSTPIP1O43586 416 aa18.93■□□□□ 0.62
SMC4-201ENST00000344722 TPP2P29144 1249 aaPredicted RBP18.93■□□□□ 0.62
SMC4-201ENST00000344722 TRIM49D1C9J1S8 452 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 TFRCP02786 760 aaKnown RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 MRPL28Q13084 256 aaKnown RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 LRRC6Q86X45 466 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 PPEF1O14829 653 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 CYP27B1O15528 508 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 KCNQ4P56696 695 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 ITGB1BP2Q9UKP3 347 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 USP31Q70CQ4 1352 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 THRAP10827 490 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 TCN1P20061 433 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 NUDT2P50583 147 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 ATXN3P54252 364 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 SLC27A3Q5K4L6 730 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 ZNF786Q8N393 782 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 MYLK2Q9H1R3 596 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 SEMA6BQ9H3T3 888 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 FAM8A1Q9UBU6 413 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 OASLQ15646 514 aaKnown RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 C4orf50Q6ZRC1 276 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 THNSL1Q8IYQ7 743 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 ALKQ9UM73 1620 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 AP3B1O00203 1094 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 CDH2P19022 906 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 PSMC5P62195 406 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 CENPPQ6IPU0 288 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 GJB7Q6PEY0 223 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 ZNF184Q99676 751 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 RBAKQ9NYW8 714 aaPredicted RBP18.92■□□□□ 0.62
SMC4-201ENST00000344722 PCDHB2Q9Y5E7 798 aa18.92■□□□□ 0.62
SMC4-201ENST00000344722 SRGAP2CP0DJJ0 459 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 C4orf22Q6V702 233 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 KRT27Q7Z3Y8 459 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 OR6B3Q8NGW1 331 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 PRCCQ92733 491 aaPredicted RBP18.91■□□□□ 0.62
SMC4-201ENST00000344722 ATXN7L3BQ96GX2 97 aa18.91■□□□□ 0.62
SMC4-201ENST00000344722 VPS33BQ9H267 617 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms