RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CAV1Q03135 178 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 CUL1Q13616 776 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 NXNQ6DKJ4 435 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 CES5AQ6NT32 575 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 RIN2Q8WYP3 895 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 MFSD1Q9H3U5 465 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 SYNDIG1Q9H7V2 258 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 BTBD7Q9P203 1132 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 ACO1P21399 889 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 GOLGA8QA0A0J9YX86 632 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 A0A1B0GTH6 734 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 GOLGA8OA6NCC3 632 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 GOLGA8NF8WBI6 632 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 PLA2G6O60733 806 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 MYLK4Q86YV6 388 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 ITIH6Q6UXX5 1313 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 ROR1Q01973 937 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 AP1B1Q10567 949 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 DUSP28Q4G0W2 176 aa17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 GLE1Q53GS7 698 aaKnown RBP17.3■□□□□ 0.36
SMARCA4-201ENST00000344626 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■■■■□ 25.1
SMARCA4-201ENST00000344626 RNPC3Q96LT9 517 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 GAD1Q99259 594 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 EMILIN2Q9BXX0 1053 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 PRDM10Q9NQV6 1147 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 LMO7Q8WWI1 1683 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 LTN1O94822 1766 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 MT-ND3P03897 115 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 MCF2P10911 925 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 EIF4BP23588 611 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 HIRAP54198 1017 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 PIGHQ14442 188 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 GOLGA7BQ2TAP0 167 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 CCDC60Q8IWA6 550 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 ATP8A1Q9Y2Q0 1164 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 AHDC1Q5TGY3 1603 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 SEPT4O43236 478 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 HARS2P49590 506 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 MIB1Q86YT6 1006 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 USP20Q9Y2K6 914 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 SSU72P8A0A1W2PR75 194 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 RPL10AP62906 217 aaKnown RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 NR1H3Q13133 447 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 WHAMMQ8TF30 809 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 MCUR1Q96AQ8 359 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 BCAP29Q9UHQ4 241 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 AKAP12Q02952 1782 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 KLRG2A4D1S0 409 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 EPHB3P54753 998 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 GRIN1Q05586 938 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 MYBPC2Q14324 1141 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 LENG1Q96BZ8 264 aaPredicted RBP17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 CGRRF1Q99675 332 aa17.29■□□□□ 0.36
SMARCA4-201ENST00000344626 SYN1P17600 705 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 RARRES1P49788 294 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 DHX9Q08211 1270 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 LRRC8CQ8TDW0 803 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 APOL5Q9BWW9 433 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 RNF19AQ9NV58 838 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 FAM8A1Q9UBU6 413 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 DFFAO00273 331 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 GPC4O75487 556 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 ATICP31939 592 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 SLC27A1Q6PCB7 646 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 OTOP1Q7RTM1 612 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 C10orf67Q8IYJ2 551 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 TMC2Q8TDI7 906 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 FMO2Q99518 471 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 TTLL13PA6NNM8 815 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 GRAP2O75791 330 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 FGBP02675 491 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 LHX1P48742 406 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 IL9RQ01113 521 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 DEUP1Q05D60 604 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 CCDC157Q569K6 752 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 IL31RAQ8NI17 732 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 MTMR12Q9C0I1 747 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 CERS4Q9HA82 394 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 IQANK1A0A1B0GTG1 560 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 PIK3CDO00329 1044 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 DUSP11O75319 330 aaKnown RBP17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 CD52P31358 61 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 ANO4Q32M45 955 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 MCUQ8NE86 351 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 ZNF558Q96NG5 402 aa17.28■□□□□ 0.36
SMARCA4-201ENST00000344626 CXCL8P10145 99 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 VEGFBP49765 207 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 TOB1P50616 345 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 MDM2Q00987 491 aaPredicted RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 WDR49Q8IV35 697 aa17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 SRRM1Q8IYB3 904 aaKnown RBP17.27■□□□□ 0.36
SMARCA4-201ENST00000344626 RCOR2Q8IZ40 523 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms