RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 MTMR12Q9C0I1 747 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 GPRC5DQ9NZD1 345 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 PCNTO95613 3336 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 C5orf60A6NFR6 353 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 DRD4P21917 467 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 MARK3P27448 753 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 SSR1P43307 286 aaKnown RBP22.75■■□□□ 1.23
CCDC38-201ENST00000344280 SPRED3Q2MJR0 410 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 FBXW10Q5XX13 1052 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 YTHDF3Q7Z739 585 aaKnown RBP22.75■■□□□ 1.23
CCDC38-201ENST00000344280 TRIM50Q86XT4 487 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 SNF8Q96H20 258 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 FAM129AQ9BZQ8 928 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 MTFR1LQ9H019 292 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 TMEM134Q9H6X4 195 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 MSCO60682 206 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 AGTP01019 485 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF394Q53GI3 561 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 TRIM72Q6ZMU5 477 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 RHOT1Q8IXI2 618 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 FAM212AQ96EL1 285 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 NEU2Q9Y3R4 380 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 CAPN7Q9Y6W3 813 aa22.75■■□□□ 1.23
CCDC38-201ENST00000344280 FOXO6A8MYZ6 492 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 PSTPIP1O43586 416 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ITIH2P19823 946 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 TBXAS1P24557 533 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF132P52740 706 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 NCAPG2Q86XI2 1143 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF668Q96K58 619 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 JPH2Q9BR39 696 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 PI4K2BG5E9Z4 385 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 MAFO75444 373 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ARIH2O95376 493 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 SRGAP2CP0DJJ0 459 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 EDNRBP24530 442 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 RFC5P40937 340 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 MYL6P60660 151 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 SF3A3Q12874 501 aaKnown RBP eCLIP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 TRMT10CQ7L0Y3 403 aaKnown RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 BRSK2Q8IWQ3 736 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 UBR7Q8N806 425 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 C3orf20Q8ND61 904 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ATL2Q8NHH9 583 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 CENPTQ96BT3 561 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 CHMP6Q96FZ7 201 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF317Q96PQ6 595 aaPredicted RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 TCHPQ9BT92 498 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 OSBPL8Q9BZF1 889 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 CCDC113Q9H0I3 377 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 MRPL47Q9HD33 250 aaKnown RBP22.74■■□□□ 1.23
CCDC38-201ENST00000344280 NRBP2Q9NSY0 501 aa22.74■■□□□ 1.23
CCDC38-201ENST00000344280 ASS1P00966 412 aaKnown RBP22.73■■□□□ 1.23
CCDC38-201ENST00000344280 ADCY8P40145 1251 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 CPLX4Q7Z7G2 160 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 KATNAL2Q8IYT4 538 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 LRRC71Q8N4P6 559 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 VCPIP1Q96JH7 1222 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 CTNNAL1Q9UBT7 734 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 GGA2Q9UJY4 613 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 CREB1P16220 341 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 MMP8P22894 467 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 BRD2P25440 801 aaKnown RBP22.73■■□□□ 1.23
CCDC38-201ENST00000344280 C1QBPQ07021 282 aaKnown RBP22.73■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF252P-AS1Q0IIN9 211 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 KYNUQ16719 465 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.73■■□□□ 1.23
CCDC38-201ENST00000344280 EXOC3L1Q86VI1 746 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 RIOX2Q8IUF8 465 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 FEZF2Q8TBJ5 459 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 MAIP1Q8WWC4 291 aa22.73■■□□□ 1.23
CCDC38-201ENST00000344280 BBXQ8WY36 941 aaPredicted RBP22.73■■□□□ 1.23
CCDC38-201ENST00000344280 GAS8O95995 478 aa22.72■■□□□ 1.23
CCDC38-201ENST00000344280 KRT10P13645 584 aa22.72■■□□□ 1.23
CCDC38-201ENST00000344280 ATF2P15336 505 aa22.72■■□□□ 1.23
CCDC38-201ENST00000344280 PRMT1Q99873 361 aaKnown RBP22.72■■□□□ 1.23
CCDC38-201ENST00000344280 OSBPL7Q9BZF2 842 aa22.72■■□□□ 1.23
CCDC38-201ENST00000344280 HSDL1Q3SXM5 330 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 ZBTB10Q96DT7 871 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 CABS1Q96KC9 395 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 SCLT1Q96NL6 688 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 SPATC1LQ9H0A9 340 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 PARVAQ9NVD7 372 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 ANAPC5Q9UJX4 755 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 SCINQ9Y6U3 715 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 PTPRFP10586 1907 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 TOM1L1O75674 476 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 FSBPO95073 299 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 GJB1P08034 283 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 POTEJP0CG39 1038 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 CDR1P51861 262 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 KAZNQ674X7 775 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 MFSD5Q6N075 450 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 ZPBP2Q6X784 338 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 SYDE1Q6ZW31 735 aaPredicted RBP22.71■■□□□ 1.23
CCDC38-201ENST00000344280 CDR2LQ86X02 465 aaPredicted RBP22.71■■□□□ 1.23
CCDC38-201ENST00000344280 TMEM130Q8N3G9 435 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 GLIS1Q8NBF1 620 aa22.71■■□□□ 1.23
CCDC38-201ENST00000344280 RNF149Q8NC42 400 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms