RNA–Protein interactions for RNA: ENST00000343677.3

HIST1H1C-201, Transcript of histone cluster 1 H1 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H1C, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1C-201ENST00000343677 CTSAP10619 480 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 GLUD2P49448 558 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 MXI1P50539 228 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 MYL5Q02045 173 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 UBE3AQ05086 875 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 NCOA4Q13772 614 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 KCNJ12Q14500 433 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 USP41Q3LFD5 358 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 ZACNQ401N2 412 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 SV2CQ496J9 727 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 CT47A1Q5JQC4 288 aaPredicted RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 DHX40Q8IX18 779 aaKnown RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 TAS1R2Q8TE23 839 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 MRPL38Q96DV4 380 aaKnown RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 HPDLQ96IR7 371 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 SUSD3Q96L08 255 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 SENP8Q96LD8 212 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 NAT10Q9H0A0 1025 aaKnown RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 THAP9Q9H5L6 903 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 TMEM8AQ9HCN3 771 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 MAGEC2Q9UBF1 373 aaPredicted RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 MTCH2Q9Y6C9 303 aa13.48□□□□□ -0.25
HIST1H1C-201ENST00000343677 CHD9Q3L8U1 2897 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 KPNA7A9QM74 516 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 CYB561D2O14569 222 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 IKBKBO14920 756 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 FSCN2O14926 492 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 PER2O15055 1255 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 TRAPPC3O43617 180 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 EFEMP2O95967 443 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 GTF2F1P35269 517 aaKnown RBP eCLIP13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 ZNF165P49910 485 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 CDR1P51861 262 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 AP3M2P53677 418 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 MYL7Q01449 175 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 SMC1AQ14683 1233 aaKnown RBP13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 NCAPHQ15003 741 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 PTPN14Q15678 1187 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 ZNF699Q32M78 642 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 TCEAL5Q5H9L2 206 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 KRT39Q6A163 491 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 SPOPLQ6IQ16 392 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 SCARA5Q6ZMJ2 495 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 FAM114A1Q8IWE2 563 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 TRIM59Q8IWR1 403 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 SEMA4DQ92854 862 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 TTPALQ9BTX7 342 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 LMAN2LQ9H0V9 348 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 IGFLR1Q9H665 355 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 MRPL17Q9NRX2 175 aaKnown RBP13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 POLIQ9UNA4 740 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.47□□□□□ -0.254e-15■□□□□ 10.5
HIST1H1C-201ENST00000343677 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
HIST1H1C-201ENST00000343677 TSC2P49815 1807 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 C2orf71A6NGG8 1288 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 PES1O00541 588 aaKnown RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 HCRTO43612 131 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 STX10O60499 249 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 ODC1P11926 461 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 FGFR3P22607 806 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 PNPLA4P41247 253 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 RAP1GAPP47736 663 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 NRIP1P48552 1158 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 FMO5P49326 533 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 MARSP56192 900 aaKnown RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 ARPP19P56211 112 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 KCNH2Q12809 1159 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 ELAVL2Q12926 359 aaKnown RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 MYO1EQ12965 1108 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 KIAA0319Q5VV43 1072 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 C15orf39Q6ZRI6 1047 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 LUZP1Q86V48 1076 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 LRRC52Q8N7C0 313 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 MMS19Q96T76 1030 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 NSUN3Q9H649 340 aaKnown RBP13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 CBX8Q9HC52 389 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 CHST7Q9NS84 486 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 TAB2Q9NYJ8 693 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 PCDHB8Q9UN66 801 aa13.46□□□□□ -0.25
HIST1H1C-201ENST00000343677 CHD7Q9P2D1 2997 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 M0QZQ0 153 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 ADAM12O43184 909 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 AFPP02771 609 aaKnown RBP13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 GTF2H1P32780 548 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 AARSP49588 968 aaKnown RBP eCLIP13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 TNNC1P63316 161 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 RBM10P98175 930 aaKnown RBP13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 DSG1Q02413 1049 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 ENPEPQ07075 957 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 LRMPQ12912 555 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 BMS1Q14692 1282 aaKnown RBP13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 PSMD5Q16401 504 aa13.45□□□□□ -0.26
HIST1H1C-201ENST00000343677 WDR72Q3MJ13 1102 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms