RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 EHD2Q9NZN4 543 aa7.92□□□□□ -1.14
ZNF540-202ENST00000343599 ANKFY1Q9P2R3 1169 aa7.92□□□□□ -1.14
ZNF540-202ENST00000343599 SYF2O95926 243 aaKnown RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TECP42680 631 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 BCAR1P56945 870 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 PSMC5P62195 406 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 GNL2Q13823 731 aaKnown RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 GLB1LQ6UWU2 654 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 LRRC55Q6ZSA7 311 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 POLR3CQ9BUI4 534 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TMEM121BQ9BXQ6 578 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TMEM206Q9H813 350 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 LTB4R2Q9NPC1 389 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 GMEB2Q9UKD1 530 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 ST3GAL5Q9UNP4 418 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TRIOBPQ9H2D6 2365 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 FRMD3A2A2Y4 597 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 LIN7AO14910 233 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 MEFVO15553 781 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 CYP11A1P05108 521 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TUBBP07437 444 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 IFNAR1P17181 557 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 SLC8A1P32418 973 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 ARL2P36404 184 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 DNM1Q05193 864 aaKnown RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 ACTN3Q08043 901 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 SNCBQ16143 134 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 CAMK4Q16566 473 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 USP41Q3LFD5 358 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 CKAP2LQ8IYA6 745 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 SDR16C5Q8N3Y7 309 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 B4GALNT2Q8NHY0 566 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TRMT2BQ96GJ1 504 aaKnown RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 ANO3Q9BYT9 981 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 CSRNP2Q9H175 543 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 SLC39A2Q9NP94 309 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 VPS45Q9NRW7 570 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 KCNH7Q9NS40 1196 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 PRMT7Q9NVM4 692 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 RTEL1Q9NZ71 1219 aa7.91□□□□□ -1.14
ZNF540-202ENST00000343599 CORO1CQ9ULV4 474 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-202ENST00000343599 TICRRQ7Z2Z1 1910 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 A0A0D9SFI3 127 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 MYBPHLA2RUH7 354 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 ARNTLO00327 626 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 PEX10O60683 326 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 LAMP2P13473 410 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 LRPAP1P30533 357 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 DNAJA1P31689 397 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 NUDT1P36639 197 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 SLC35G1Q2M3R5 365 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 FAM47CQ5HY64 1035 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 CLLU1OSQ5K130 101 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 HYIQ5T013 277 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 SEPT14Q6ZU15 432 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 MAP4K3Q8IVH8 894 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 ACRBPQ8NEB7 543 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 CEP76Q8TAP6 659 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 WASF1Q92558 559 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 LENG9Q96B70 501 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 RSRC1Q96IZ7 334 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 AGAP3Q96P47 875 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 OSBPL9Q96SU4 736 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 TEKT3Q9BXF9 490 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 TSGA10Q9BZW7 698 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 GBP3Q9H0R5 595 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 NOC2LQ9Y3T9 749 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 SF3B1O75533 1304 aaKnown RBP eCLIP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 OR6C75A6NL08 312 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 ENO4A6NNW6 628 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 EIF3HO15372 352 aaKnown RBP eCLIP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 SMNDC1O75940 238 aaKnown RBP eCLIP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 MYL1P05976 194 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 RPL17P18621 184 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 TPP2P29144 1249 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 NRIP1P48552 1158 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 SFSWAPQ12872 951 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 TEAD4Q15561 434 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 VARS2Q5ST30 1063 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 PLPP4Q5VZY2 271 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 CAPRIN2Q6IMN6 1127 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 DCLRE1AQ6PJP8 1040 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 ALKAL1Q6UXT8 129 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 DHX40Q8IX18 779 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 IQCGQ9H095 443 aaKnown RBP7.9□□□□□ -1.14
ZNF540-202ENST00000343599 IL1RAPL2Q9NP60 686 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 ARHGEF3Q9NR81 526 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 DSEQ9UL01 958 aa7.9□□□□□ -1.14
ZNF540-202ENST00000343599 RHOBTB1O94844 696 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 STAU1O95793 577 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 PEX19P40855 299 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 VCPP55072 806 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 PTENP60484 403 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ROR2Q01974 943 aaKnown RBP7.89□□□□□ -1.15
ZNF540-202ENST00000343599 FZD5Q13467 585 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 DRP2Q13474 957 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC40Q4G0X9 1142 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 UBXN11Q5T124 520 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 SLC30A9Q6PML9 568 aa7.89□□□□□ -1.15
ZNF540-202ENST00000343599 ANKS3Q6ZW76 656 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms