RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 CCDC62Q6P9F0 684 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 ALYREFQ86V81 257 aaKnown RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 GRK7Q8WTQ7 553 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 BICD1Q96G01 975 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 DNAJC1Q96KC8 554 aaKnown RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 TIPINQ9BVW5 301 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 SPATA31A1Q5TZJ5 1347 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 VAMP7P51809 220 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 HADHBP55084 474 aaKnown RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 PDIA2Q13087 525 aaKnown RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 GPS1Q13098 491 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 SYCP2LQ5T4T6 812 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 OPTNQ96CV9 577 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 EURLQ9NYK6 297 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 LNPEPQ9UIQ6 1025 aa15.72■□□□□ 0.11
CLCN1-201ENST00000343257 NOCTQ9UK39 431 aaKnown RBP15.72■□□□□ 0.11
CLCN1-201ENST00000343257 K7ENM7 598 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 MEIS2O14770 477 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 TCEA3O75764 348 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 KITP10721 976 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 ATF7P17544 494 aaPredicted RBP15.71■□□□□ 0.11
CLCN1-201ENST00000343257 SSTR1P30872 391 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 CETN1Q12798 172 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 CMPK2Q5EBM0 449 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 HIPK4Q8NE63 616 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 JDP2Q8WYK2 163 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 TMEM165Q9HC07 324 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 DMAP1Q9NPF5 467 aaPredicted RBP15.71■□□□□ 0.11
CLCN1-201ENST00000343257 TRAFD1O14545 582 aaPredicted RBP15.71■□□□□ 0.11
CLCN1-201ENST00000343257 HNRNPRO43390 633 aaKnown RBP15.71■□□□□ 0.11
CLCN1-201ENST00000343257 OR6B1O95007 311 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 PLCB3Q01970 1234 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 PLEKHO2Q8TD55 490 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 FNBP1Q96RU3 617 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 THTPAQ9BU02 230 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 SPATA16Q9BXB7 569 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 TRIM55Q9BYV6 548 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 PDP2Q9P2J9 529 aa15.71■□□□□ 0.11
CLCN1-201ENST00000343257 STX18Q9P2W9 335 aaKnown RBP15.71■□□□□ 0.11
CLCN1-201ENST00000343257 FAM237BA0A1B0GVD1 139 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 TXNDC9O14530 226 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 MUTP22033 750 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 MFSD14BQ5SR56 506 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 PASD1Q8IV76 773 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 CCDC89Q8N998 374 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 LENG9Q96B70 501 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 PTCD3Q96EY7 689 aaKnown RBP15.71■□□□□ 0.1
CLCN1-201ENST00000343257 PI4K2AQ9BTU6 479 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 ASCC2Q9H1I8 757 aaPredicted RBP15.71■□□□□ 0.1
CLCN1-201ENST00000343257 GALNT8Q9NY28 637 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 CLIC5Q9NZA1 410 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 MARCOQ9UEW3 520 aaPredicted RBP15.71■□□□□ 0.1
CLCN1-201ENST00000343257 ACTL7BQ9Y614 415 aa15.71■□□□□ 0.1
CLCN1-201ENST00000343257 RNASEH1O60930 286 aaKnown RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 CYP11B1P15538 503 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 RHBDL3P58872 404 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 APLFQ8IW19 511 aaPredicted RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 RIBC1Q8N443 379 aaPredicted RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 SEMA4DQ92854 862 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 TSSK1BQ9BXA7 367 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 EBF3Q9H4W6 596 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 TLE6Q9H808 572 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 MANSC1Q9H8J5 431 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 OLFML3Q9NRN5 406 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 TOPORSQ9NS56 1045 aaPredicted RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 CYP1A2P05177 515 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 BGNP21810 368 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 ARSEP51690 589 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 USP46P62068 366 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 TFDP1Q14186 410 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 OLFML2BQ68BL8 750 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 C1orf186Q6ZWK4 172 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 NMUR2Q9GZQ4 415 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 CYLDQ9NQC7 956 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 SAR1AQ9NR31 198 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 CHCHD3Q9NX63 227 aaKnown RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 GTF3C4Q9UKN8 822 aa15.7■□□□□ 0.1
CLCN1-201ENST00000343257 SMG5Q9UPR3 1016 aaKnown RBP15.7■□□□□ 0.1
CLCN1-201ENST00000343257 CCDC160A6NGH7 325 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 PRPF4O43172 522 aaKnown RBP eCLIP15.69■□□□□ 0.1
CLCN1-201ENST00000343257 KCNQ2O43526 872 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ZWINTO95229 277 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 MYL2P10916 166 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 GAP43P17677 238 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 INHBCP55103 352 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ARL4CP56559 192 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 TAS2R40P59535 323 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 CAV1Q03135 178 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.69■□□□□ 0.1
CLCN1-201ENST00000343257 VCX3BQ9H321 246 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 VCX3AQ9NNX9 186 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 WRAP73Q9P2S5 460 aaPredicted RBP15.69■□□□□ 0.1
CLCN1-201ENST00000343257 DNPEPQ9ULA0 475 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ZBTB21Q9ULJ3 1066 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 RPS6KL1Q9Y6S9 549 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 MROH7Q68CQ1 1323 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 ATAD5Q96QE3 1844 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 MEI4A8MW99 385 aa15.69■□□□□ 0.1
CLCN1-201ENST00000343257 FCHO1O14526 889 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms