RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 FAM163BP0C2L3 166 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 CCDC172P0C7W6 258 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 HNRNPH3P31942 346 aaKnown RBP17.54■□□□□ 0.4
SNED1-202ENST00000342631 CLCNKBP51801 687 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 TNNC1P63316 161 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 DEFB103AP81534 67 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 RAPGEF1Q13905 1077 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 DRAP1Q14919 205 aaPredicted RBP17.54■□□□□ 0.4
SNED1-202ENST00000342631 SPOPLQ6IQ16 392 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 DCLRE1AQ6PJP8 1040 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 RRAGAQ7L523 313 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 COLGALT2Q8IYK4 626 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 TMEM175Q9BSA9 504 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 BCO2Q9BYV7 579 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 ABHD10Q9NUJ1 306 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 SCN1AP35498 2009 aa17.54■□□□□ 0.4
SNED1-202ENST00000342631 ZBBXA8MT70 800 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 KPNA7A9QM74 516 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 TMEM189-UBE2V1I3L0A0 370 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 STAT1P42224 750 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 EPHB4P54760 987 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 ADKP55263 362 aaKnown RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 LILRA4P59901 499 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 PDXDC1Q6P996 788 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 GJB7Q6PEY0 223 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 DPH6Q7L8W6 267 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 CMTR2Q8IYT2 770 aaKnown RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 SHC3Q92529 594 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 KREMEN1Q96MU8 473 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 ZNHIT6Q9NWK9 470 aaKnown RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 AIPL1Q9NZN9 384 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 ARHGEF37A1IGU5 675 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 CASTOR2A6NHX0 329 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 F8VZ95 297 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 DDHD2O94830 711 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 ASPAP45381 313 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 SFMBT2Q5VUG0 894 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 SCARA3Q6AZY7 606 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 ZNF280BQ86YH2 543 aa17.53■□□□□ 0.4
SNED1-202ENST00000342631 RC3H2Q9HBD1 1191 aaKnown RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 NXF1Q9UBU9 619 aaKnown RBP17.53■□□□□ 0.4
SNED1-202ENST00000342631 LRRC53A6NM62 1247 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 PPEF2O14830 753 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 NRDCO43847 1150 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 SOX5P35711 763 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 AARSP49588 968 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNED1-202ENST00000342631 ARHGAP44Q17R89 818 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 CCDC112Q8NEF3 446 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 NRDE2Q9H7Z3 1164 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.52■□□□□ 0.4
SNED1-202ENST00000342631 SLC4A7Q9Y6M7 1214 aa17.52■□□□□ 0.4
SNED1-202ENST00000342631 GJB5O95377 273 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 ALDH2P05091 517 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 RASIP1Q5U651 963 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 TOP6BLQ8N6T0 577 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 AJAP1Q9UKB5 411 aaPredicted RBP17.51■□□□□ 0.39
SNED1-202ENST00000342631 CNTN6Q9UQ52 1028 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 SNX9Q9Y5X1 595 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 BZW2Q9Y6E2 419 aaKnown RBP17.51■□□□□ 0.39
SNED1-202ENST00000342631 B3GAT3O94766 335 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 FERP16591 822 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 GATMP50440 423 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 HTRA4P83105 476 aaPredicted RBP17.51■□□□□ 0.39
SNED1-202ENST00000342631 CDK17Q00537 523 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 MEA1Q16626 185 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 LIMS2Q7Z4I7 341 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 LRRC8AQ8IWT6 810 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 FAM71AQ8IYT1 594 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 TMEM130Q8N3G9 435 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 SPATA18Q8TC71 538 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 KAT5Q92993 513 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 COLEC11Q9BWP8 271 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 GPR88Q9GZN0 384 aa17.51■□□□□ 0.39
SNED1-202ENST00000342631 PTPRSQ13332 1948 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 COL4A6Q14031 1691 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 FOXN3O00409 490 aaPredicted RBP17.5■□□□□ 0.39
SNED1-202ENST00000342631 TRAPPC3O43617 180 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 HUS1O60921 280 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 TACC1O75410 805 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 FECHP22830 423 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 BPIFB4P59827 614 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 UBR7Q8N806 425 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 APPL2Q8NEU8 664 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 MMS19Q96T76 1030 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 YME1L1Q96TA2 773 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 DNAI2Q9GZS0 605 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 INSL6Q9Y581 213 aa17.5■□□□□ 0.39
SNED1-202ENST00000342631 SPTLC1O15269 473 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 ACO1P21399 889 aaKnown RBP17.49■□□□□ 0.39
SNED1-202ENST00000342631 MAGEA10P43363 369 aaPredicted RBP17.49■□□□□ 0.39
SNED1-202ENST00000342631 OR1G1P47890 313 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 INCA1Q0VD86 236 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 BTG3Q14201 252 aaPredicted RBP17.49■□□□□ 0.39
SNED1-202ENST00000342631 HS1BP3Q53T59 392 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 TMEM86AQ8N2M4 240 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 ARID3AQ99856 593 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 PAAF1Q9BRP4 392 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 CISHQ9NSE2 258 aa17.49■□□□□ 0.39
SNED1-202ENST00000342631 CXXC1Q9P0U4 656 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms