RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 THPOP40225 353 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 PTPN11Q06124 597 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 PTK7Q13308 1070 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 ARHGEF6Q15052 776 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 ZNF667Q5HYK9 610 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 ZNF677Q86XU0 584 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SLC43A3Q8NBI5 491 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SLC35G2Q8TBE7 412 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 RFFLQ8WZ73 363 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 TRIM6Q9C030 488 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 GOLPH3Q9H4A6 298 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SMYD3Q9H7B4 428 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 NXF1Q9UBU9 619 aaKnown RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 COG5Q9UP83 839 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 A0A1W2PQ45 241 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 A0A1W2PQY0 241 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 TADA3O75528 432 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 CLSTN1O94985 981 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 STAU1O95793 577 aaKnown RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 FTCDO95954 541 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 CYP1A1P04798 512 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 GNA15P30679 374 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 CDH8P55286 799 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 TUBB2AQ13885 445 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 TCEAL1Q15170 157 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 WDR72Q3MJ13 1102 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 FAM26DQ5JW98 314 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 GLRA4Q5JXX5 417 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 ACAD10Q6JQN1 1059 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SLFN11Q7Z7L1 901 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 WHAMMQ8TF30 809 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 HPDLQ96IR7 371 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 FAXDC2Q96IV6 333 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 TUBB2BQ9BVA1 445 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 ERVK-5Q9HDB9 667 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SNX12Q9UMY4 172 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SAR1BQ9Y6B6 198 aa18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 V9GYY5 206 aaPredicted RBP18.35■□□□□ 0.53
FRMD4A-202ENST00000342409 SSTR3P32745 418 aaPredicted RBP18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 YARSP54577 528 aaKnown RBP18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 RBP5P82980 135 aa18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 FBXO47Q5MNV8 452 aa18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 MEI1Q5TIA1 1274 aa18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 CTNNBL1Q8WYA6 563 aaPredicted RBP18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.34■□□□□ 0.53
FRMD4A-202ENST00000342409 SMIM28A0A1B0GU29 152 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 MEIS3P2A8K0S8 358 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 ZNF185O15231 689 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 RPLP2P05387 115 aaKnown RBP18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 KCNE1P15382 129 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 NOP2P46087 812 aaKnown RBP18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 SMYD5Q6GMV2 418 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 TWF2Q6IBS0 349 aaKnown RBP18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 TRAF7Q6Q0C0 670 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 ZNF606Q8WXB4 792 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 TFAP2BQ92481 460 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 CYFIP2Q96F07 1278 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 TWNKQ96RR1 684 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 UNC93B1Q9H1C4 597 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 TRPV6Q9H1D0 765 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 HMGXB4Q9UGU5 601 aa18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 CHORDC1Q9UHD1 332 aaPredicted RBP18.33■□□□□ 0.52
FRMD4A-202ENST00000342409 DYNC1I1O14576 645 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 ATMINO43313 823 aaPredicted RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 MGEA5O60502 916 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 HADHBP55084 474 aaKnown RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 NOMO3P69849 1222 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 GPC5P78333 572 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 SOX4Q06945 474 aaPredicted RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 NFX1Q12986 1120 aaKnown RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 LPIN1Q14693 890 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 WHAMMP3Q1A5X7 153 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 ZNF394Q53GI3 561 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 GLT1D1Q96MS3 346 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 ABCB6Q9NP58 842 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PARP2Q9UGN5 583 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PHF24Q9UPV7 400 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 STXBP5LQ9Y2K9 1186 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PDE2AO00408 941 aaPredicted RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PTGESO14684 152 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 THAP12O43422 761 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 CYP1A2P05177 515 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 GHRP10912 638 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PRLRP16471 622 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 BRD2P25440 801 aaKnown RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 CD52P31358 61 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 RAD23BP54727 409 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 CENPCQ03188 943 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 DSC3Q14574 896 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 ZNF618Q5T7W0 954 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 COG1Q8WTW3 980 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 CPA5Q8WXQ8 436 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 ELOVL4Q9GZR5 314 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PADI3Q9ULW8 664 aa18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 PACSIN2Q9UNF0 486 aaPredicted RBP18.32■□□□□ 0.52
FRMD4A-202ENST00000342409 BUB1BO60566 1050 aaPredicted RBP18.31■□□□□ 0.52
FRMD4A-202ENST00000342409 CILPO75339 1184 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms