RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 REXO1Q8N1G1 1221 aaKnown RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 ATP11CQ8NB49 1132 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 HELBQ8NG08 1087 aaPredicted RBP19.56■□□□□ 0.72
SMPD1-201ENST00000342245 PANX3Q96QZ0 392 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 NUMBLQ9Y6R0 609 aa19.56■□□□□ 0.72
SMPD1-201ENST00000342245 TCRBV7S2A1N4TA0A589 114 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 B2RBV5 119 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 PEX1O43933 1283 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 TOM1O60784 492 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 MAGEA4P43358 317 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 DLGAP5Q15398 846 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 NOP9Q86U38 636 aaKnown RBP19.55■□□□□ 0.72
SMPD1-201ENST00000342245 NLRP10Q86W26 655 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 SYNE4Q8N205 404 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 CCDC89Q8N998 374 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 FGFBP2Q9BYJ0 223 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 Q9H521 79 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 S100A14Q9HCY8 104 aa19.55■□□□□ 0.72
SMPD1-201ENST00000342245 POTECB2RU33 542 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ALDH2P05091 517 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ATP5BP06576 529 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 C1orf146Q5VVC0 180 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 Q6ZNX1 250 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 CENPUQ71F23 418 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 SFR1Q86XK3 245 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ERMNQ8TAM6 284 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 TEKT1Q969V4 418 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 NAP1L4Q99733 375 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 PFDN4Q9NQP4 134 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 SAP30BPQ9UHR5 308 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 DNAJC12Q9UKB3 198 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 PAPPAQ13219 1627 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 HTR3EA5X5Y0 456 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 POTEMA6NI47 508 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 CYTH3O43739 400 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 CAMTA2O94983 1202 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 MAPK6Q16659 721 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 TRIM67Q6ZTA4 783 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 RAPH1Q70E73 1250 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ULK2Q8IYT8 1036 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 KCNN1Q92952 543 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ALKBH8Q96BT7 664 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 MTBPQ96DY7 904 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 VPS50Q96JG6 964 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 POP1Q99575 1024 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 AGPAT1Q99943 283 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 LBHD1Q9BQE6 289 aaPredicted RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 TMEM120AQ9BXJ8 343 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 RBM38Q9H0Z9 239 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 C1orf21Q9H246 121 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 MANSC1Q9H8J5 431 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 SEPT11Q9NVA2 429 aaKnown RBP19.54■□□□□ 0.72
SMPD1-201ENST00000342245 ASAP1Q9ULH1 1129 aa19.54■□□□□ 0.72
SMPD1-201ENST00000342245 hCG_1984214I3L0E3 225 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 SPOPO43791 374 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 SMIM18P0DKX4 95 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 LRRC8BQ6P9F7 803 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 KLHL35Q6PF15 583 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 PATL1Q86TB9 770 aaKnown RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 ZCCHC9Q8N567 271 aaKnown RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 ZNF713Q8N859 430 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 OXNAD1Q96HP4 312 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 NUDT12Q9BQG2 462 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 TSSK1BQ9BXA7 367 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 ZNHIT2Q9UHR6 403 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 CCDC160A6NGH7 325 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 TMEM110-MUSTN1A8MSY1 372 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 FUT4P22083 530 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 BCAMP50895 628 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 CENPCQ03188 943 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 MESDQ14696 234 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 PKN2Q16513 984 aaKnown RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 GJB7Q6PEY0 223 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 OLFML1Q6UWY5 402 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 MARVELD2Q8N4S9 558 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 CEP70Q8NHQ1 597 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 JADE3Q92613 823 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 PPP1R1BQ9UD71 204 aaPredicted RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 PPM1HQ9ULR3 514 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 PLA2G4CQ9UP65 541 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 ZNF711Q9Y462 761 aa19.53■□□□□ 0.72
SMPD1-201ENST00000342245 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.53■□□□□ 0.72
SMPD1-201ENST00000342245 TNS2Q63HR2 1409 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 SPECC1L-ADORA2AF8WAN1 911 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 FCHO1O14526 889 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 PLA2G4BP0C869 781 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 GCAP28676 217 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 EAPPQ56P03 285 aaPredicted RBP19.52■□□□□ 0.72
SMPD1-201ENST00000342245 GPBP1Q86WP2 473 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 DNAJC17Q9NVM6 304 aaKnown RBP19.52■□□□□ 0.72
SMPD1-201ENST00000342245 PSMC3IPQ9P2W1 217 aaPredicted RBP19.52■□□□□ 0.72
SMPD1-201ENST00000342245 FETUBQ9UGM5 382 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 C15orf38-AP3S2A0A0A6YYH1 394 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 SH3PXD2BA1X283 911 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 AKAP3O75969 853 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
SMPD1-201ENST00000342245 DLATP10515 647 aaKnown RBP19.52■□□□□ 0.72
SMPD1-201ENST00000342245 EVA1CP58658 441 aa19.52■□□□□ 0.72
SMPD1-201ENST00000342245 PPIDQ08752 370 aaKnown RBP19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms