RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 AP1B1Q10567 949 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 DPYDQ12882 1025 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 TDRD10Q5VZ19 366 aaKnown RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 NUGGCQ68CJ6 796 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 TAF2Q6P1X5 1199 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 MFN1Q8IWA4 741 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 RNF25Q96BH1 459 aaPredicted RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 BTBD6Q96KE9 485 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 ZNF512Q96ME7 567 aaPredicted RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 AP1M1Q9BXS5 423 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 PLEKHA4Q9H4M7 779 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 XAB2Q9HCS7 855 aaKnown RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 TCHHQ07283 1943 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 FAM237AA0A1B0GTK4 181 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 CDH16O75309 829 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 CABYRO75952 493 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 ACSL3O95573 720 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 GYS1P13807 737 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 IL1R1P14778 569 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 CORO7P57737 925 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 PLD1Q13393 1074 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 PCBP1Q15365 356 aaKnown RBP eCLIP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 NAB2Q15742 525 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 ZKSCAN8Q15776 578 aaPredicted RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 KCTD16Q68DU8 428 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 EFCAB12Q6NXP0 572 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 SETD3Q86TU7 594 aaPredicted RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 NOP9Q86U38 636 aaKnown RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 GLYCTKQ8IVS8 523 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 NDEL1Q9GZM8 345 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 KIAA1683Q9H0B3 1180 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 VPS11Q9H270 941 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 VTA1Q9NP79 307 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 KCNH7Q9NS40 1196 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 CHCHD3Q9NX63 227 aaKnown RBP8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 IPPQ9Y573 584 aa8.1□□□□□ -1.11
ATP2B4-201ENST00000341360 TULP2O00295 520 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 CAPN15O75808 1086 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TOMM70O94826 608 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 UCHL3P15374 230 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 STIP1P31948 543 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 CXCR5P32302 372 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ALDH7A1P49419 539 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 AARSP49588 968 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 IFT88Q13099 833 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 EFTUD2Q15029 972 aaKnown RBP eCLIP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 IZUMO3Q5VZ72 239 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 UGT3A1Q6NUS8 523 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PASD1Q8IV76 773 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PPM1NQ8N819 430 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SLC7A14Q8TBB6 771 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ATG4CQ96DT6 458 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 ERGIC2Q96RQ1 377 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 CPVLQ9H3G5 476 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 STN1Q9H668 368 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PCSK1NQ9UHG2 260 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 GTF3C4Q9UKN8 822 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 L1RE1Q9UN81 338 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 DNAJC6O75061 913 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SPAG7O75391 227 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 HLA-DRAP01903 254 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 LRG1P02750 347 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TRIM49P0CI25 452 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TRIM49CP0CI26 452 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 CDH2P19022 906 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 EPHX2P34913 555 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 FDFT1P37268 417 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 HDAC4P56524 1084 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RPS6P62753 249 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NME3Q13232 169 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 BYSLQ13895 437 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PATL1Q86TB9 770 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 FAM163AQ96GL9 167 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SGSM3Q96HU1 749 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RNPC3Q96LT9 517 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PLAAQ9Y263 795 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 FNDC3AQ9Y2H6 1198 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TNS2Q63HR2 1409 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 MOCS2O96007 188 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 AGTP01019 485 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 MMEP08473 750 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NMT1P30419 496 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SPRP35270 261 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 VSNL1P62760 191 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PDIA2Q13087 525 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TBX2Q13207 712 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 TRIP13Q15645 432 aaPredicted RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RABGAP1LQ5R372 815 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 LRIG3Q6UXM1 1119 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RASSF3Q86WH2 238 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 MAML1Q92585 1016 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 MRPS31Q92665 395 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 MRPL9Q9BYD2 267 aaKnown RBP8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 SIK2Q9H0K1 926 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NDFIP2Q9NV92 336 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 NMRK1Q9NWW6 199 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 RGL1Q9NZL6 768 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 STOML1Q9UBI4 398 aa8.09□□□□□ -1.11
ATP2B4-201ENST00000341360 PPARGC1AQ9UBK2 798 aaKnown RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms