RNA–Protein interactions for RNA: ENST00000341199.10

SIMC1-202, Transcript of SUMO interacting motifs containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SIMC1, Length 2,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-202ENST00000341199 TRIM11Q96F44 468 aa23.3■■□□□ 1.32
SIMC1-202ENST00000341199 SELENOOQ9BVL4 669 aa23.3■■□□□ 1.32
SIMC1-202ENST00000341199 AVENQ9NQS1 362 aaPredicted RBP23.3■■□□□ 1.32
SIMC1-202ENST00000341199 RBM12Q9NTZ6 932 aaKnown RBP23.3■■□□□ 1.32
SIMC1-202ENST00000341199 NXF1Q9UBU9 619 aaKnown RBP23.3■■□□□ 1.32
SIMC1-202ENST00000341199 ALG6Q9Y672 507 aa23.3■■□□□ 1.32
SIMC1-202ENST00000341199 TRIP12Q14669 1992 aaPredicted RBP23.3■■□□□ 1.32
SIMC1-202ENST00000341199 SEPT4O43236 478 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 CEP104O60308 925 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 TUBBP07437 444 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 MYBL1P10243 752 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 VSNL1P62760 191 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 NKX3-2P78367 333 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 CC2D1AQ6P1N0 951 aaPredicted RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 PASD1Q8IV76 773 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 ACTRT1Q8TDG2 376 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 ZNF606Q8WXB4 792 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 CAPNS2Q96L46 248 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 VRTNQ9H8Y1 702 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 SNTG2Q9NY99 539 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 TMEM110-MUSTN1A8MSY1 372 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 TOMM70O94826 608 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 PGK1P00558 417 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 POLR2BP30876 1174 aaKnown RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 SSTR3P32745 418 aaPredicted RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 NSFP46459 744 aaKnown RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 GUCY2FP51841 1108 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 CRYBB1P53674 252 aaPredicted RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 CACNB2Q08289 660 aaPredicted RBP23.29■■□□□ 1.32
SIMC1-202ENST00000341199 WDR93Q6P2C0 686 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 MON1BQ7L1V2 547 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 RASGEF1CQ8N431 466 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 USP38Q8NB14 1042 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 PLEKHA5Q9HAU0 1116 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 ITGA11Q9UKX5 1188 aa23.29■■□□□ 1.32
SIMC1-202ENST00000341199 ZRANB2O95218 330 aaKnown RBP eCLIP23.28■■□□□ 1.32
SIMC1-202ENST00000341199 MESDQ14696 234 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 KIF12Q96FN5 646 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 SNX27Q96L92 541 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 SDCBP2Q9H190 292 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 DPP3Q9NY33 737 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 DERAQ9Y315 318 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 CASP8AP2Q9UKL3 1982 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 SEC31AO94979 1220 aaKnown RBP23.28■■□□□ 1.32
SIMC1-202ENST00000341199 RARBP10826 455 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 BRD2P25440 801 aaKnown RBP23.28■■□□□ 1.32
SIMC1-202ENST00000341199 RAP1GAPP47736 663 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 SP3Q02447 781 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 CXCL17Q6UXB2 119 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 PHF13Q86YI8 300 aaPredicted RBP23.28■■□□□ 1.32
SIMC1-202ENST00000341199 RPS6KC1Q96S38 1066 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 SPC25Q9HBM1 224 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 AGAP1Q9UPQ3 857 aa23.28■■□□□ 1.32
SIMC1-202ENST00000341199 CITO14578 2027 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 RNASE9P60153 205 aaKnown RBP23.27■■□□□ 1.32
SIMC1-202ENST00000341199 DEFB115Q30KQ5 88 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 NBPF20Q3BBV1 942 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 WDR72Q3MJ13 1102 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 ZNF394Q53GI3 561 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 PPP1R2P3Q6NXS1 205 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 REM2Q8IYK8 340 aaPredicted RBP23.27■■□□□ 1.32
SIMC1-202ENST00000341199 ZSWIM1Q9BR11 485 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 CXCL16Q9H2A7 254 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 SCN10AQ9Y5Y9 1956 aa23.27■■□□□ 1.32
SIMC1-202ENST00000341199 STAU1O95793 577 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 RRM1P23921 792 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 RBP5P82980 135 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 CCDC70Q6NSX1 233 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 TAF2Q6P1X5 1199 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 HNRNPLLQ8WVV9 542 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 HPDLQ96IR7 371 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 BTBD6Q96KE9 485 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 LRRC1Q9BTT6 524 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 SMYD3Q9H7B4 428 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 GTF2IRD1Q9UHL9 959 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 TMEM59LQ9UK28 342 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 PIN4Q9Y237 131 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 MIF4GDA9UHW6 222 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 PGRMC1O00264 195 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 ADAMTS4O75173 837 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 COMTP21964 271 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 DCAF12L1Q5VU92 463 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 CYP3A43Q9HB55 503 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 ARFGAP3Q9NP61 516 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 RNF186Q9NXI6 227 aa23.26■■□□□ 1.31
SIMC1-202ENST00000341199 NOC2LQ9Y3T9 749 aaKnown RBP23.26■■□□□ 1.31
SIMC1-202ENST00000341199 CCND3P30281 292 aaPredicted RBP23.25■■□□□ 1.31
SIMC1-202ENST00000341199 YARSP54577 528 aaKnown RBP23.25■■□□□ 1.31
SIMC1-202ENST00000341199 CDH8P55286 799 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 PTP4A2Q12974 167 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 UBXN11Q5T124 520 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 UBE2Q2Q8WVN8 375 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 TFAP2BQ92481 460 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 VCPIP1Q96JH7 1222 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 C11orf70Q9BRQ4 267 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 NXF3Q9H4D5 531 aaKnown RBP23.25■■□□□ 1.31
SIMC1-202ENST00000341199 ADAM22Q9P0K1 906 aa23.25■■□□□ 1.31
SIMC1-202ENST00000341199 LSM8O95777 96 aaKnown RBP23.24■■□□□ 1.31
SIMC1-202ENST00000341199 C1QBPQ07021 282 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms