RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 OSBPL9Q96SU4 736 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 B3GAT3O94766 335 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 ICAM1P05362 532 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 HARS2P49590 506 aaKnown RBP13.27□□□□□ -0.29
XIRP1-201ENST00000340369 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.29
XIRP1-201ENST00000340369 UPF1Q92900 1129 aaKnown RBP eCLIP13.27□□□□□ -0.29
XIRP1-201ENST00000340369 DCUN1D1Q96GG9 259 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 SNF8Q96H20 258 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 VPS33BQ9H267 617 aa13.27□□□□□ -0.29
XIRP1-201ENST00000340369 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.27□□□□□ -0.29
XIRP1-201ENST00000340369 CSF1RP07333 972 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 CTNNB1P35222 781 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ERVK-24P63145 666 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 KNOP1Q1ED39 458 aaKnown RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 CALR3Q96L12 384 aaKnown RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 STOML1Q9UBI4 398 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SLC25A13Q9UJS0 675 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 GMNCA6NCL1 334 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 MSCO60682 206 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ALDH2P05091 517 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ITPRIPL1Q6GPH6 555 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 RRM2BQ7LG56 351 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 KDELC2Q7Z4H8 507 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 GHRP10912 638 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 RASA1P20936 1047 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 AVPR1AP37288 418 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 EPHB3P54753 998 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SFSWAPQ12872 951 aaKnown RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 FSCN1Q16658 493 aaKnown RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 RUBCNLQ9H714 662 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SLC28A3Q9HAS3 691 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SETD4Q9NVD3 440 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 FBXL5Q9UKA1 691 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 KRT4P19013 534 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SULT1E1P49888 294 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 CUL3Q13618 768 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 NECTIN1Q15223 517 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 CDKL3Q8IVW4 592 aaPredicted RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
XIRP1-201ENST00000340369 SCFD1Q8WVM8 642 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 C1orf54Q8WWF1 131 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 GOLPH3LQ9H4A5 285 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ODC1P11926 461 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 HDAC4P56524 1084 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ANKRD40Q6AI12 368 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 RFWD2Q8NHY2 731 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ABHD8Q96I13 439 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 MXRA8Q9BRK3 442 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 NDE1Q9NXR1 346 aa13.26□□□□□ -0.29
XIRP1-201ENST00000340369 ATP9BO43861 1147 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 SERPIND1P05546 499 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 KRT7P08729 469 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PDHBP11177 359 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 ARHGEF7Q14155 803 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 CTXN3Q4LDR2 81 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 ANO5Q75V66 913 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TRIM48Q8IWZ4 208 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 DDX56Q9NY93 547 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 AIPL1Q9NZN9 384 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 STRNO43815 780 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PMS1P54277 932 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 ERLEC1Q96DZ1 483 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 HDAC6Q9UBN7 1215 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TNS2Q63HR2 1409 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PJA2O43164 708 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 RNASEH1O60930 286 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 EFCAB14O75071 495 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 SEC24DO94855 1032 aaPredicted RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PCSK1P29120 753 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 MAGEA9P43362 315 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 NCAPHQ15003 741 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TTC39CQ8N584 583 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TRPM4Q8TD43 1214 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TRIM54Q9BYV2 358 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 THG1LQ9NWX6 298 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 NAGPAQ9UK23 515 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 NKRFO15226 690 aaKnown RBP eCLIP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TLL1O43897 1013 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 TYK2P29597 1187 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PRAMEF19Q5SWL8 479 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 CCDC137Q6PK04 289 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 RGS7P49802 495 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 ACTN3Q08043 901 aaPredicted RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 PLEKHA5Q9HAU0 1116 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 ALG13Q9NP73 1137 aaKnown RBP13.25□□□□□ -0.29
XIRP1-201ENST00000340369 MRFAP1Q9Y605 127 aa13.25□□□□□ -0.29
XIRP1-201ENST00000340369 DDTLA6NHG4 134 aaPredicted RBP13.24□□□□□ -0.29
XIRP1-201ENST00000340369 PRKAR2AP13861 404 aaKnown RBP13.24□□□□□ -0.29
XIRP1-201ENST00000340369 CHRNA3P32297 505 aa13.24□□□□□ -0.29
XIRP1-201ENST00000340369 ACTR2P61160 394 aa13.24□□□□□ -0.29
XIRP1-201ENST00000340369 PPIL2Q13356 520 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms