RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 LOC102724159A0A0B4J2E5 919 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 DYNC1LI2O43237 492 aaPredicted RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 CABYRO75952 493 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 CD4P01730 458 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 RARGP13631 454 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 GARTP22102 1010 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 SLC1A1P43005 524 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 ALDH5A1P51649 535 aaPredicted RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 PMS2P54278 862 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 PSMC5P62195 406 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 CDR2Q01850 454 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 CAV1Q03135 178 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 LMNB2Q03252 620 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 PPP3CAQ08209 521 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 PWP2Q15269 919 aaKnown RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 FSCN1Q16658 493 aaKnown RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 C6orf118Q5T5N4 469 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 ERMARDQ5T6L9 678 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 DENND2CQ68D51 928 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 ZNF746Q6NUN9 644 aaPredicted RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 CXCL17Q6UXB2 119 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 TRMT10CQ7L0Y3 403 aaKnown RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 HAUS6Q7Z4H7 955 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 SLC13A5Q86YT5 568 aaPredicted RBP11.51□□□□□ -0.57
RTN3-201ENST00000338850 GPIHBP1Q8IV16 184 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 PRELID2Q8N945 189 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 KIFAP3Q92845 792 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 MFSD14AQ96MC6 490 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 FOXP3Q9BZS1 431 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 TMEM117Q9H0C3 514 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 GRHL1Q9NZI5 618 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 WHRNQ9P202 907 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 CTTNBP2NLQ9P2B4 639 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 Q9Y3F1 56 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 DOCK5Q9H7D0 1870 aa11.51□□□□□ -0.57
RTN3-201ENST00000338850 LAMA2P24043 3122 aaKnown RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 GOLGA6L7A0A1B0GV03 622 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 SFI1A8K8P3 1242 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 WDR64B1ANS9 1081 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 FSCN2O14926 492 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 ASAP2O43150 1006 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 CHMP2AO43633 222 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 TCEA3O75764 348 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 FTLP02792 175 aaPredicted RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 GSTA1P08263 222 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 CHRNB2P17787 502 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 SMTNP53814 917 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 CLDN10P78369 228 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 ACTN3Q08043 901 aaPredicted RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 ITIH4Q14624 930 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 TRIM72Q6ZMU5 477 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 DDX42Q86XP3 938 aaKnown RBP eCLIP11.5□□□□□ -0.57
RTN3-201ENST00000338850 RELL1Q8IUW5 271 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 ARHGEF19Q8IW93 802 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 RPUSD2Q8IZ73 545 aaKnown RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 ART4Q93070 314 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 NT5C1BQ96P26 610 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 CDX2Q99626 313 aaPredicted RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 TTYH1Q9H313 450 aaPredicted RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 KIAA1586Q9HCI6 787 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 UBE2TQ9NPD8 197 aaPredicted RBP11.5□□□□□ -0.57
RTN3-201ENST00000338850 HOMER3Q9NSC5 361 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 TRPC6Q9Y210 931 aa11.5□□□□□ -0.57
RTN3-201ENST00000338850 MYH9P35579 1960 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 E7EVH7 732 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 NDC80O14777 642 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 STAM2O75886 525 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 CSF2RAP15509 400 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 ABCB4P21439 1286 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 EDNRBP24530 442 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 ATP5DP30049 168 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 YWHABP31946 246 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 FLT3P36888 993 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 COILP38432 576 aaPredicted RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 PDE6CP51160 858 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 RWDD2BP57060 319 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 BPIFB4P59827 614 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 RNASE9P60153 205 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 RPS6P62753 249 aaKnown RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 FMO1Q01740 532 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 PPIGQ13427 754 aaKnown RBP eCLIP11.49□□□□□ -0.57
RTN3-201ENST00000338850 ITGA7Q13683 1181 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 SIX1Q15475 284 aaPredicted RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 DUSP28Q4G0W2 176 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 TMEM240Q5SV17 173 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 RNF207Q6ZRF8 634 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 C16orf59Q7L2K0 433 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 RPAINQ86UA6 219 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 PALB2Q86YC2 1186 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 CCDC50Q8IVM0 306 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 CACNA2D3Q8IZS8 1091 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 BBOF1Q8ND07 529 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 ZNF564Q8TBZ8 553 aaPredicted RBP11.49□□□□□ -0.57
RTN3-201ENST00000338850 MAGEC3Q8TD91 643 aa11.49□□□□□ -0.57
RTN3-201ENST00000338850 HELQQ8TDG4 1101 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms