RNA–Protein interactions for RNA: ENST00000338635.10

XRCC4-202, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS P4 TSL 2 BASIC

Gene XRCC4, Length 1,579 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-202ENST00000338635 ZEB2O60315 1214 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 DDCP20711 480 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 HNRNPMP52272 730 aaKnown RBP eCLIP3.55□□□□□ -1.84
XRCC4-202ENST00000338635 MGAT2Q10469 447 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 FHL1Q13642 323 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 DHCR24Q15392 516 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 SUMO4Q6EEV6 95 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 ORAI2Q96SN7 254 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 IFT22Q9H7X7 185 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 NRIP3Q9NQ35 241 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 CTTNBP2NLQ9P2B4 639 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 NEU2Q9Y3R4 380 aa3.55□□□□□ -1.84
XRCC4-202ENST00000338635 MYBBP1AQ9BQG0 1328 aaKnown RBP3.54□□□□□ -1.84
XRCC4-202ENST00000338635 A0A087X0B3 334 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 VWC2LB2RUY7 222 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 MOSPD3O75425 235 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 AGFG2O95081 481 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 PPP3CBP16298 524 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 SCAND1P57086 179 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 ATP8B2P98198 1209 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 ZNF844Q08AG5 666 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 DACT2Q5SW24 774 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 UTP14CQ5TAP6 766 aaKnown RBP3.54□□□□□ -1.84
XRCC4-202ENST00000338635 SLC9A4Q6AI14 798 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 OR2I1PQ8NGU4 316 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 TTC1Q99614 292 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 SEMA4CQ9C0C4 833 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 C11orf54Q9H0W9 315 aaPredicted RBP3.54□□□□□ -1.84
XRCC4-202ENST00000338635 PIF1Q9H611 641 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 MANSC1Q9H8J5 431 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 KLC4Q9NSK0 619 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 CDYLQ9Y232 598 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 PCDHGA2Q9Y5H1 932 aa3.54□□□□□ -1.84
XRCC4-202ENST00000338635 FAM171A2A8MVW0 826 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 PDE8AO60658 829 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 SUN1O94901 812 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 HAUS5O94927 633 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 LATS1O95835 1130 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 TTLL1O95922 423 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 MYCLP1P12525 358 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 MPGP29372 298 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 SLC6A4P31645 630 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 ANXA11P50995 505 aaKnown RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 NXPH1P58417 271 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 SRSF2Q01130 221 aaKnown RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 ATP2B3Q16720 1220 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 PREPLQ4J6C6 727 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 SLC44A4Q53GD3 710 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 KLHL22Q53GT1 634 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 MORN5Q5VZ52 161 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 CRELD2Q6UXH1 353 aaPredicted RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 ADGRG5Q8IZF4 528 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 B3GALNT2Q8NCR0 500 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 NSUN7Q8NE18 718 aaKnown RBP3.53□□□□□ -1.84
XRCC4-202ENST00000338635 DENND1AQ8TEH3 1009 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 SNX19Q92543 992 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 RGMAQ96B86 450 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 WACQ9BTA9 647 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 MAPRE3Q9UPY8 281 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 DNM3Q9UQ16 869 aa3.53□□□□□ -1.84
XRCC4-202ENST00000338635 TARM1B6A8C7 271 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CDC45O75419 566 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 NTN1O95631 604 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CD1AP06126 327 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 HNRNPCP07910 306 aaKnown RBP eCLIP3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CBSLP0DN79 551 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 NR2F6P10588 404 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 EPHB2P29323 1055 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CBSP35520 551 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CCT4P50991 539 aaKnown RBP3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CTXN1P60606 82 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 ITIH3Q06033 890 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 DDX46Q7L014 1031 aaKnown RBP3.52□□□□□ -1.85
XRCC4-202ENST00000338635 YTHDF3Q7Z739 585 aaKnown RBP3.52□□□□□ -1.85
XRCC4-202ENST00000338635 NEK8Q86SG6 692 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 CAMKK1Q8N5S9 505 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 SREK1Q8WXA9 508 aaKnown RBP3.52□□□□□ -1.85
XRCC4-202ENST00000338635 TBC1D30Q9Y2I9 924 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 NR2E3Q9Y5X4 410 aa3.52□□□□□ -1.85
XRCC4-202ENST00000338635 TOR1BO14657 336 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 URI1O94763 535 aaPredicted RBP3.51□□□□□ -1.85
XRCC4-202ENST00000338635 CERS1P27544 350 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 CCT8P50990 548 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 SLC5A3P53794 718 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 FOXG1P55316 489 aaPredicted RBP3.51□□□□□ -1.85
XRCC4-202ENST00000338635 MC2RQ01718 297 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 HLXQ14774 488 aaPredicted RBP3.51□□□□□ -1.85
XRCC4-202ENST00000338635 ZNF517Q6ZMY9 492 aaPredicted RBP3.51□□□□□ -1.85
XRCC4-202ENST00000338635 DCBLD1Q8N8Z6 715 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 DPF2Q92785 391 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 LRIG1Q96JA1 1093 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 QTRT1Q9BXR0 403 aaKnown RBP3.51□□□□□ -1.85
XRCC4-202ENST00000338635 VTA1Q9NP79 307 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 DNAJC28Q9NX36 388 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 SERGEFQ9UGK8 458 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 ADGRA2Q96PE1 1338 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 CCDC195A0A1B0GUA6 201 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 CYP2D6P10635 497 aa3.51□□□□□ -1.85
XRCC4-202ENST00000338635 MTHFD1P11586 935 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms