RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 TRAPPC3O43617 180 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 ATICP31939 592 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 TIGD5Q53EQ6 642 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 MIIPQ5JXC2 388 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 ZNF697Q5TEC3 545 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 TAS1R1Q7RTX1 841 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 FBXL13Q8NEE6 735 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 SPPL3Q8TCT6 385 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 GDPD5Q8WTR4 605 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 POF1BQ8WVV4 589 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 SEMA4DQ92854 862 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 VN1R3Q9BXE9 311 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 NDST4Q9H3R1 872 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 RAB20Q9NX57 234 aa15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 SF3B1O75533 1304 aaKnown RBP eCLIP15.15■□□□□ 0.02
APOBEC3B-202ENST00000335760 KPNA7A9QM74 516 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 PMM2O15305 246 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 P4HA2O15460 535 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 EFEMP2O95967 443 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 PAX3P23760 479 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 DNAJB1P25685 340 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 AARSP49588 968 aaKnown RBP eCLIP15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 COPB1P53618 953 aaKnown RBP15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 UBE3AQ05086 875 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 CETN1Q12798 172 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 ELAVL2Q12926 359 aaKnown RBP15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 SGSM1Q2NKQ1 1148 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 ZNF699Q32M78 642 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 FAM171A1Q5VUB5 890 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 SUSD3Q96L08 255 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 SENP8Q96LD8 212 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 HERC2P3Q9BVR0 1158 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 XYLT2Q9H1B5 865 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 LZTS1Q9Y250 596 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 COQ4Q9Y3A0 265 aa15.14■□□□□ 0.01
APOBEC3B-202ENST00000335760 LRRC10BA6NIK2 292 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 CYB561D2O14569 222 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 LRRN2O75325 713 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 CSPG5O95196 566 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 STAU1O95793 577 aaKnown RBP15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 SOD2P04179 222 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 GAS2L3Q86XJ1 694 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 CEP57Q86XR8 500 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 RNF168Q8IYW5 571 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 VPS52Q8N1B4 723 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 CCDC150Q8NCX0 1101 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 TAF4BQ92750 862 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 B3GALT6Q96L58 329 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 FAM161BQ96MY7 647 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 IMPG2Q9BZV3 1241 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 NXF1Q9UBU9 619 aaKnown RBP15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 STK39Q9UEW8 545 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 PCDHB8Q9UN66 801 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 SNX9Q9Y5X1 595 aa15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 COL4A4P53420 1690 aaPredicted RBP15.13■□□□□ 0.01
APOBEC3B-202ENST00000335760 CHD9Q3L8U1 2897 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 M0QZQ0 153 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 ODC1P11926 461 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 FGFR3P22607 806 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 TKTP29401 623 aaKnown RBP15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 TNNC1P63316 161 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 GRIN2CQ14957 1233 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 USP41Q3LFD5 358 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 WDR72Q3MJ13 1102 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 ZNF667Q5HYK9 610 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 WDR44Q5JSH3 913 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 KIAA1841Q6NSI8 718 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 APTXQ7Z2E3 356 aaKnown RBP15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 EHBP1Q8NDI1 1231 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 CRACR2AQ9BSW2 395 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 ZBP1Q9H171 429 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 RBSNQ9H1K0 784 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 PRDM12Q9H4Q4 367 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 VRTNQ9H8Y1 702 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 GDAP2Q9NXN4 497 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 POLIQ9UNA4 740 aa15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 TIMM13Q9Y5L4 95 aaPredicted RBP15.12■□□□□ 0.01
APOBEC3B-202ENST00000335760 ARHGEF37A1IGU5 675 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 SYN3O14994 580 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 HUS1O60921 280 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 SERPINC1P01008 464 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 CA8P35219 290 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 ERVFC1P60507 584 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 NOP14P78316 857 aaKnown RBP15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 LRMPQ12912 555 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 RTP2Q5QGT7 225 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 GPR153Q6NV75 609 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 GBP6Q6ZN66 633 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 APPL2Q8NEU8 664 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 AUTS2Q8WXX7 1259 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 MMS19Q96T76 1030 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TCF25Q9BQ70 676 aa15.11■□□□□ 0.01
APOBEC3B-202ENST00000335760 TTPALQ9BTX7 342 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms