RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 JAM2P57087 298 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 GCNT1Q02742 428 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 C9orf50Q5SZB4 431 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 CD300LGQ6UXG3 332 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 CCDC150Q8NCX0 1101 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 NIF3L1Q9GZT8 377 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 NRDE2Q9H7Z3 1164 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 DNAJB4Q9UDY4 337 aa23.1■■□□□ 1.29
TPM1-204ENST00000334895 LAMA3Q16787 3333 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 RFX1P22670 979 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 RNASELQ05823 741 aaKnown RBP23.09■■□□□ 1.29
TPM1-204ENST00000334895 CUL2Q13617 745 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 WDR72Q3MJ13 1102 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 PAN2Q504Q3 1202 aaKnown RBP23.09■■□□□ 1.29
TPM1-204ENST00000334895 RASIP1Q5U651 963 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 CACNA2D4Q7Z3S7 1137 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 RSPH1Q8WYR4 309 aa23.09■■□□□ 1.29
TPM1-204ENST00000334895 MRPL9Q9BYD2 267 aaKnown RBP23.09■■□□□ 1.29
TPM1-204ENST00000334895 NXF1Q9UBU9 619 aaKnown RBP23.09■■□□□ 1.29
TPM1-204ENST00000334895 LUC7L2Q9Y383 392 aaKnown RBP23.09■■□□□ 1.29
TPM1-204ENST00000334895 AKR1B15C9JRZ8 316 aaPredicted RBP23.08■■□□□ 1.29
TPM1-204ENST00000334895 F8W810 466 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 CLSTN1O94985 981 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 PNMA6AP0CW24 399 aaPredicted RBP23.08■■□□□ 1.29
TPM1-204ENST00000334895 KRT9P35527 623 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 ZBED6P86452 979 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 MYO1EQ12965 1108 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 RAPGEF1Q13905 1077 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 ZNF667Q5HYK9 610 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 E4F1Q66K89 784 aaPredicted RBP23.08■■□□□ 1.29
TPM1-204ENST00000334895 PDXDC1Q6P996 788 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 LRRC43Q8N309 656 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 ZNF560Q96MR9 790 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 UROC1Q96N76 676 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 STK33Q9BYT3 514 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 R3HCC1Q9Y3T6 440 aaKnown RBP23.08■■□□□ 1.29
TPM1-204ENST00000334895 DAAM1Q9Y4D1 1078 aa23.08■■□□□ 1.29
TPM1-204ENST00000334895 LAMA2P24043 3122 aaKnown RBP23.08■■□□□ 1.28
TPM1-204ENST00000334895 LRRC53A6NM62 1247 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 PNPLA4P41247 253 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 TAF6P49848 677 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 LILRA4P59901 499 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 DRAP1Q14919 205 aaPredicted RBP23.08■■□□□ 1.28
TPM1-204ENST00000334895 SHHQ15465 462 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 ARHGAP44Q17R89 818 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 SCARA5Q6ZMJ2 495 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 UBR7Q8N806 425 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 DDX27Q96GQ7 796 aaKnown RBP23.08■■□□□ 1.28
TPM1-204ENST00000334895 BCO2Q9BYV7 579 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 SDCBP2Q9H190 292 aa23.08■■□□□ 1.28
TPM1-204ENST00000334895 F8VZ95 297 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 ITGB1P05556 798 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 ACO1P21399 889 aaKnown RBP23.07■■□□□ 1.28
TPM1-204ENST00000334895 GPIHBP1Q8IV16 184 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 CNGA4Q8IV77 575 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 DNAJC7Q99615 494 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 SMYD3Q9H7B4 428 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 ABHD10Q9NUJ1 306 aa23.07■■□□□ 1.28
TPM1-204ENST00000334895 KPNA7A9QM74 516 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 KIF4AO95239 1232 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 GJB5O95377 273 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 TPM1P09493 284 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 RAP1GAPP47736 663 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 MFAP3P55082 362 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 ENOSF1Q7L5Y1 443 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 TDHQ8IZJ6 230 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 SHC3Q92529 594 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 FAM193BQ96PV7 902 aaPredicted RBP23.06■■□□□ 1.28
TPM1-204ENST00000334895 CWH43Q9H720 699 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 GDAP2Q9NXN4 497 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 SNX9Q9Y5X1 595 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 SLC4A7Q9Y6M7 1214 aa23.06■■□□□ 1.28
TPM1-204ENST00000334895 FOXN3O00409 490 aaPredicted RBP23.05■■□□□ 1.28
TPM1-204ENST00000334895 WEE2P0C1S8 567 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 TBXAS1P24557 533 aaPredicted RBP23.05■■□□□ 1.28
TPM1-204ENST00000334895 AARSP49588 968 aaKnown RBP eCLIP23.05■■□□□ 1.28
TPM1-204ENST00000334895 GSDMDP57764 484 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 HTRA4P83105 476 aaPredicted RBP23.05■■□□□ 1.28
TPM1-204ENST00000334895 SV2CQ496J9 727 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 FAXDC2Q96IV6 333 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 SPAG5Q96R06 1193 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 MYO6Q9UM54 1294 aa23.05■■□□□ 1.28
TPM1-204ENST00000334895 GOLGA6L6A8MZA4 724 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 B3GAT3O94766 335 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 OR1G1P47890 313 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 SLC11A1P49279 550 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 CDH8P55286 799 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 TNNC1P63316 161 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 DCLRE1AQ6PJP8 1040 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 LIMS2Q7Z4I7 341 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 CMTR2Q8IYT2 770 aaKnown RBP23.04■■□□□ 1.28
TPM1-204ENST00000334895 ZNF397Q8NF99 534 aaPredicted RBP23.04■■□□□ 1.28
TPM1-204ENST00000334895 OR8K1Q8NGG5 319 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 HASPINQ8TF76 798 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 FAM81BQ96LP2 452 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 SLC9A7Q96T83 725 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 PRG3Q9Y2Y8 225 aaPredicted RBP23.04■■□□□ 1.28
TPM1-204ENST00000334895 TMEM189-UBE2V1I3L0A0 370 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 NRP1O14786 923 aa23.04■■□□□ 1.28
TPM1-204ENST00000334895 PBX3P40426 434 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms