RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 TAC1P20366 129 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 NSUN2Q08J23 767 aaKnown RBP eCLIP15.81■□□□□ 0.12
C9orf47-201ENST00000334490 MFSD10Q14728 455 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 FSCN1Q16658 493 aaKnown RBP15.81■□□□□ 0.12
C9orf47-201ENST00000334490 IQSEC1Q6DN90 963 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 TAF2Q6P1X5 1199 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 ACOT1Q86TX2 421 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 ATL2Q8NHH9 583 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 SLC5A5Q92911 643 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 WDR18Q9BV38 432 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 TMEM150BA6NC51 233 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 FOXN3O00409 490 aaPredicted RBP15.81■□□□□ 0.12
C9orf47-201ENST00000334490 TXNDC9O14530 226 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 CYB561D2O14569 222 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 CHEK2O96017 543 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 LRG1P02750 347 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 NR1D1P20393 614 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 FRA10AC1Q70Z53 315 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 DDX53Q86TM3 631 aaKnown RBP15.81■□□□□ 0.12
C9orf47-201ENST00000334490 TTC17Q96AE7 1141 aa15.81■□□□□ 0.12
C9orf47-201ENST00000334490 RASA4BC9J798 803 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 EEF2KO00418 725 aaKnown RBP15.8■□□□□ 0.12
C9orf47-201ENST00000334490 RASA4O43374 803 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 AP1G2O75843 785 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 GHRP10912 638 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 KLHL38Q2WGJ6 581 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 IL31Q6EBC2 164 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 SPATA4Q8NEY3 305 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 TINF2Q9BSI4 451 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 SNX12Q9UMY4 172 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 A0A1W2PQJ5 194 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CYP4A22Q5TCH4 519 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 RAD9BQ6WBX8 426 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 TAS2R42Q7RTR8 314 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CHSY1Q86X52 802 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 USP33Q8TEY7 942 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 SNF8Q96H20 258 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CHORDC1Q9UHD1 332 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-201ENST00000334490 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.8■□□□□ 0.12
C9orf47-201ENST00000334490 E5RI56 91 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 GPD1P21695 349 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 SESN2P58004 480 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-201ENST00000334490 RAPGEF5Q92565 580 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 SEMA6BQ9H3T3 888 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 UBA6A0AVT1 1052 aaPredicted RBP15.8■□□□□ 0.12
C9orf47-201ENST00000334490 TMEM253P0C7T8 217 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 BEX3Q00994 111 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 TTI2Q6NXR4 508 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 VSIG10LQ86VR7 867 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 TTC30BQ8N4P2 665 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 ATPAF2Q8N5M1 289 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 NLGN2Q8NFZ4 835 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 HASPINQ8TF76 798 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CLMNQ96JQ2 1002 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CGRRF1Q99675 332 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 OLFML3Q9NRN5 406 aa15.8■□□□□ 0.12
C9orf47-201ENST00000334490 CXCL8P10145 99 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 FGFR4P22455 802 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 DBN1Q16643 649 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 GSPT2Q8IYD1 628 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TTI1O43156 1089 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 AKAP3O75969 853 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 PON1P27169 355 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 HARS2P49590 506 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 PSEN2P49810 448 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 PMS2P54278 862 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 POU5F1BQ06416 359 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TDRD10Q5VZ19 366 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 CENPPQ6IPU0 288 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 SRRM1Q8IYB3 904 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TAS1R2Q8TE23 839 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 SUDS3Q9H7L9 328 aaPredicted RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 METTL5Q9NRN9 209 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 C3orf70A6NLC5 250 aaPredicted RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 EML1O00423 815 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 COMTP21964 271 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 NOGQ13253 232 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 DHX34Q14147 1143 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 FBXO38Q6PIJ6 1188 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TMC2Q8TDI7 906 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 MUC3BQ9H195 1237 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 RASSF4Q9H2L5 321 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 GLTPD2A6NH11 291 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 SNX2O60749 519 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 NPM3O75607 178 aaKnown RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TTC23LQ6PF05 361 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TTC8Q8TAM2 541 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 FEZF2Q8TBJ5 459 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 TRIM10Q9UDY6 481 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.79■□□□□ 0.12
C9orf47-201ENST00000334490 ALG6Q9Y672 507 aa15.79■□□□□ 0.12
C9orf47-201ENST00000334490 APRTP07741 180 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 SMTNL2Q2TAL5 461 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 ATG16L1Q676U5 607 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 ATP11CQ8NB49 1132 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 UBE2Q2Q8WVN8 375 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 KLRG1Q96E93 195 aa15.78■□□□□ 0.12
C9orf47-201ENST00000334490 RAB3IPQ96QF0 476 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms