RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 WEE2P0C1S8 567 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 LRPAP1P30533 357 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 GTF2H1P32780 548 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 ASPAP45381 313 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 FXR1P51114 621 aaKnown RBP eCLIP17.76■□□□□ 0.43
SHOX-201ENST00000334060 POU5F1Q01860 360 aaKnown RBP17.76■□□□□ 0.43
SHOX-201ENST00000334060 SURF1Q15526 300 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 WDR72Q3MJ13 1102 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 TIGD5Q53EQ6 642 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 IQCEQ6IPM2 695 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 GBP6Q6ZN66 633 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 URGCPQ8TCY9 931 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 HPDLQ96IR7 371 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
SHOX-201ENST00000334060 GPR88Q9GZN0 384 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 UBN1Q9NPG3 1134 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 XIRP2A4UGR9 3374 aa17.76■□□□□ 0.43
SHOX-201ENST00000334060 TLL1O43897 1013 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 B3GAT3O94766 335 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 GALTP07902 379 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 LILRA4P59901 499 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 ZNF699Q32M78 642 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 KLHDC7AQ5VTJ3 777 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 GPR62Q9BZJ7 368 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 TTYH3Q9C0H2 523 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 CERS4Q9HA82 394 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 ITGA11Q9UKX5 1188 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 TRANK1O15050 2925 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 TRIOBPQ9H2D6 2365 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 CA3P07451 260 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 POLR2FP61218 127 aaKnown RBP17.75■□□□□ 0.43
SHOX-201ENST00000334060 TRPC3Q13507 836 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 FKBP15Q5T1M5 1219 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 LRRC43Q8N309 656 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 PPM1KQ8N3J5 372 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 CACTINQ8WUQ7 758 aaKnown RBP17.75■□□□□ 0.43
SHOX-201ENST00000334060 C17orf80Q9BSJ5 609 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 SNX9Q9Y5X1 595 aa17.75■□□□□ 0.43
SHOX-201ENST00000334060 EFCAB14O75071 495 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 CD58P19256 250 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 ARHGAP44Q17R89 818 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 FILIP1LQ4L180 1135 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 TWNKQ96RR1 684 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 MRPL45Q9BRJ2 306 aaKnown RBP17.74■□□□□ 0.43
SHOX-201ENST00000334060 PBX4Q9BYU1 374 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 PRO3102Q9H379 93 aa17.74■□□□□ 0.43
SHOX-201ENST00000334060 UBE2TQ9NPD8 197 aaPredicted RBP17.74■□□□□ 0.43
SHOX-201ENST00000334060 UCHL3P15374 230 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 CYP3A5P20815 502 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 RBP5P82980 135 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 ENPEPQ07075 957 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 OSTM1Q86WC4 334 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 MRFAP1L1Q96HT8 127 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 SLC9A7Q96T83 725 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 L1RE1Q9UN81 338 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 PCDHGC5Q9Y5F6 944 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 VWA8A3KMH1 1905 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 LINC01553A4QN01 128 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 CASP14P31944 242 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 SSTR3P32745 418 aaPredicted RBP17.73■□□□□ 0.43
SHOX-201ENST00000334060 ADKP55263 362 aaKnown RBP17.73■□□□□ 0.43
SHOX-201ENST00000334060 RAPGEF1Q13905 1077 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 SOWAHAQ2M3V2 549 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 SPOUT1Q5T280 376 aaKnown RBP17.73■□□□□ 0.43
SHOX-201ENST00000334060 USP37Q86T82 979 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 NT5DC4Q86YG4 428 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 BAP1Q92560 729 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 FAM193BQ96PV7 902 aaPredicted RBP17.73■□□□□ 0.43
SHOX-201ENST00000334060 NAA15Q9BXJ9 866 aaKnown RBP17.73■□□□□ 0.43
SHOX-201ENST00000334060 SLC38A7Q9NVC3 462 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 DNAJC12Q9UKB3 198 aa17.73■□□□□ 0.43
SHOX-201ENST00000334060 GTPBP10A4D1E9 387 aaKnown RBP17.72■□□□□ 0.43
SHOX-201ENST00000334060 KPNA7A9QM74 516 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 PMM2O15305 246 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 ZNF500O60304 480 aaPredicted RBP17.72■□□□□ 0.43
SHOX-201ENST00000334060 MLLT1Q03111 559 aaPredicted RBP17.72■□□□□ 0.43
SHOX-201ENST00000334060 ZNF394Q53GI3 561 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 KCNT2Q6UVM3 1135 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 KBTBD7Q8WVZ9 684 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 APEX2Q9UBZ4 518 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 TSC2P49815 1807 aa17.72■□□□□ 0.43
SHOX-201ENST00000334060 SPTBN5Q9NRC6 3674 aaKnown RBP17.72■□□□□ 0.43
SHOX-201ENST00000334060 A0A1W2PQC6 194 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 P4HA2O15460 535 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 HOXA2O43364 376 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 STX10O60499 249 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 N4BP1O75113 896 aaKnown RBP17.71■□□□□ 0.43
SHOX-201ENST00000334060 LMO2P25791 158 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 TKTP29401 623 aaKnown RBP17.71■□□□□ 0.43
SHOX-201ENST00000334060 TBX2Q13207 712 aaPredicted RBP17.71■□□□□ 0.43
SHOX-201ENST00000334060 KIAA0319Q5VV43 1072 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 WSCD1Q658N2 575 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 CMTR2Q8IYT2 770 aaKnown RBP17.71■□□□□ 0.43
SHOX-201ENST00000334060 COLGALT1Q8NBJ5 622 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 SP7Q8TDD2 431 aaPredicted RBP17.71■□□□□ 0.43
SHOX-201ENST00000334060 AUTS2Q8WXX7 1259 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 SENP8Q96LD8 212 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 TMEM209Q96SK2 561 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 MMS19Q96T76 1030 aa17.71■□□□□ 0.43
SHOX-201ENST00000334060 RAD9AQ99638 391 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms