RNA–Protein interactions for RNA: ENST00000333861.4

CCDC87-201, Transcript of coiled-coil domain containing 87, humanhuman

APPRIS P1 BASIC

Gene CCDC87, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87-201ENST00000333861 SUPT3HO75486 399 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 GDF11O95390 407 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 CYP3A4P08684 503 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 IMPDH2P12268 514 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 PRKCIP41743 596 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SOX10P56693 466 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TTLL12Q14166 644 aaPredicted RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SPDYCQ5MJ68 293 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SCARA3Q6AZY7 606 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 FRMD5Q7Z6J6 570 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF184Q99676 751 aaPredicted RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TIPINQ9BVW5 301 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 EBF3Q9H4W6 596 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TDRKHQ9Y2W6 561 aaKnown RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TNS1Q9HBL0 1735 aaKnown RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 MYOCOSA0A1B0GUC4 107 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 MEI4A8MW99 385 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ABLIM1O14639 778 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SERPINB3P29508 390 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ZBTB16Q05516 673 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ALCAMQ13740 583 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 LIN52Q52LA3 116 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TRIM42Q8IWZ5 723 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 NEDD1Q8NHV4 660 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 POMGNT1Q8WZA1 660 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 INPP5DQ92835 1189 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 RUNDC3BQ96NL0 473 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TMEM109Q9BVC6 243 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 SLC17A7Q9P2U7 560 aa11.76□□□□□ -0.53
CCDC87-201ENST00000333861 TNRC6CQ9HCJ0 1690 aaKnown RBP11.76□□□□□ -0.53
CCDC87-201ENST00000333861 ZMYM2Q9UBW7 1377 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 EXOC1LA0A1B0GW35 172 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 TXNDC9O14530 226 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ZBTB7AO95365 584 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ASMTLO95671 621 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 KRT5P13647 590 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 PLS3P13797 630 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 LMNB1P20700 586 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 CHRNA5P30532 468 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 CETN2P41208 172 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 DRG2P55039 364 aaKnown RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 DYNLT1P63172 113 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 IRX4P78413 519 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 PLEKHO2Q8TD55 490 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ANKRD27Q96NW4 1050 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 RTFDC1Q9BY42 306 aaPredicted RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 STK33Q9BYT3 514 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ROPN1BQ9BZX4 212 aaPredicted RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 TMEM117Q9H0C3 514 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 RIOX1Q9H6W3 641 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ROPN1Q9HAT0 212 aaPredicted RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 MTMR4Q9NYA4 1195 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 KANSL3Q9P2N6 904 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 PCYOX1Q9UHG3 505 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ANAPC7Q9UJX3 599 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ANKRD62A6NC57 917 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 RALAP11233 206 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 CTNNA2P26232 953 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 ACVR2BQ13705 512 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 CRY2Q49AN0 593 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 MFSD14BQ5SR56 506 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 IZUMO3Q5VZ72 239 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 RINT1Q6NUQ1 792 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 LVRNQ6Q4G3 990 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 SPATA24Q86W54 205 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 MAK16Q9BXY0 300 aaKnown RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 GPRC5CQ9NQ84 441 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 HSFX1Q9UBD0 423 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 PPP1R1BQ9UD71 204 aaPredicted RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 PARP2Q9UGN5 583 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 RABGAP1Q9Y3P9 1069 aa11.75□□□□□ -0.53
CCDC87-201ENST00000333861 HEMK1Q9Y5R4 338 aaPredicted RBP11.75□□□□□ -0.53
CCDC87-201ENST00000333861 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 EDF1O60869 148 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 DCTN3O75935 186 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 UFL1O94874 794 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 GSTA2P09210 222 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 HARSP12081 509 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ATF2P15336 505 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 GALK1P51570 392 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 GPC5P78333 572 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 GPSM2P81274 684 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ARHGAP4P98171 946 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 BTKQ06187 659 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 CCDC15Q0P6D6 951 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 PEX6Q13608 980 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 EML3Q32P44 896 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 PAOXQ6QHF9 649 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ZNF365Q70YC5 407 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 TRMT10CQ7L0Y3 403 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 EIF2AK1Q9BQI3 630 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 ASCC2Q9H1I8 757 aaPredicted RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 TRABDQ9H4I3 376 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 VCX3AQ9NNX9 186 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 TYW1Q9NV66 732 aaKnown RBP11.74□□□□□ -0.53
CCDC87-201ENST00000333861 TAS2R1Q9NYW7 299 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 APEX2Q9UBZ4 518 aa11.74□□□□□ -0.53
CCDC87-201ENST00000333861 SCAF8Q9UPN6 1271 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms