RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 CENPTQ96BT3 561 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 TUBGCP4Q9UGJ1 667 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 MTUS1Q9ULD2 1270 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 EMSYQ7Z589 1322 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 TGFB1I1O43294 461 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 GAS7O60861 476 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 PIAS1O75925 651 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 HAUS5O94927 633 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 PSMG1O95456 288 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 KRT5P13647 590 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 SHMT1P34896 483 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 RFC1P35251 1148 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-202ENST00000333611 DSG1Q02413 1049 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 MMEL1Q495T6 779 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 KLC3Q6P597 504 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 TBC1D16Q8TBP0 767 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 STK33Q9BYT3 514 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 DBNDD1Q9H9R9 158 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 CHKBQ9Y259 395 aa12.53□□□□□ -0.4
LIMK2-202ENST00000333611 ARHGEF35A5YM69 484 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 UBAP1LF5GYI3 381 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 GOLGA8RI6L899 631 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 ABLIM1O14639 778 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 KIAA0391O15091 583 aaKnown RBP12.52□□□□□ -0.4
LIMK2-202ENST00000333611 DDX3YO15523 660 aaKnown RBP12.52□□□□□ -0.4
LIMK2-202ENST00000333611 TMEM253P0C7T8 217 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 ATP2B4P23634 1241 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 TTC27Q6P3X3 843 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.52□□□□□ -0.4
LIMK2-202ENST00000333611 CLPTM1LQ96KA5 538 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 AGPAT1Q99943 283 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 DRC3Q9H069 523 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 APPL1Q9UKG1 709 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 USTQ9Y2C2 406 aa12.52□□□□□ -0.4
LIMK2-202ENST00000333611 ROBO1Q9Y6N7 1651 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 C2orf71A6NGG8 1288 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 CYP26A1O43174 497 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 DCTN3O75935 186 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PRKCIP41743 596 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 MARSP56192 900 aaKnown RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 HPCAP84074 193 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 ITGA7Q13683 1181 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 DUPD1Q68J44 220 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 DUS1LQ6P1R4 473 aaKnown RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 CCDC125Q86Z20 511 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PRELID2Q8N945 189 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 SH3TC2Q8TF17 1288 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 ANKRD27Q96NW4 1050 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 KLF6Q99612 283 aaPredicted RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 THTPAQ9BU02 230 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 TIPINQ9BVW5 301 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 APEX2Q9UBZ4 518 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PITPNM2Q9BZ72 1349 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 MYOCOSA0A1B0GUC4 107 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 F5H6K3 240 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 MEIS2O14770 477 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 SMARCA1P28370 1054 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PIK3CAP42336 1068 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 KLRC3Q07444 240 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 CETN1Q12798 172 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 ATP1A4Q13733 1029 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PABPC1LQ4VXU2 614 aaKnown RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PRR5LQ6MZQ0 368 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 KBTBD2Q8IY47 623 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 RNF169Q8NCN4 708 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 TUT1Q9H6E5 874 aaKnown RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 SELENONQ9NZV5 590 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 PRKAG3Q9UGI9 489 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 ANGPTL2Q9UKU9 493 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 STXBP5LQ9Y2K9 1186 aa12.52□□□□□ -0.41
LIMK2-202ENST00000333611 HEMK1Q9Y5R4 338 aaPredicted RBP12.52□□□□□ -0.41
LIMK2-202ENST00000333611 H3BRJ5 948 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 PHF2O75151 1096 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 BCRP11274 1271 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 CYTH1Q15438 398 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 TMEM214Q6NUQ4 689 aaKnown RBP12.51□□□□□ -0.41
LIMK2-202ENST00000333611 NLRP9Q7RTR0 991 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ARHGEF19Q8IW93 802 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 SLC26A7Q8TE54 656 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 CASP10Q92851 521 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 SRPK1Q96SB4 655 aaKnown RBP12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ARMC7Q9H6L4 198 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 LIN28AQ9H9Z2 209 aaKnown RBP12.51□□□□□ -0.41
LIMK2-202ENST00000333611 SGPL1O95470 568 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ENO1P06733 434 aaKnown RBP12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ATP5DP30049 168 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 HOXD12P35452 270 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ADCY8P40145 1251 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
LIMK2-202ENST00000333611 GALNTL6Q49A17 601 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 ARHGAP27Q6ZUM4 889 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 RASGEF1CQ8N431 466 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 TCEAL9Q9UHQ7 104 aa12.51□□□□□ -0.41
LIMK2-202ENST00000333611 O00370 1275 aa12.5□□□□□ -0.41
LIMK2-202ENST00000333611 ATP5HO75947 161 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms