RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 SCLYQ96I15 445 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 HPDLQ96IR7 371 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 PPP1R10Q96QC0 940 aaKnown RBP24.93■■□□□ 1.58
TSEN54-201ENST00000333213 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP24.93■■□□□ 1.58
TSEN54-201ENST00000333213 HIPK3Q9H422 1215 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 NOCTQ9UK39 431 aaKnown RBP24.93■■□□□ 1.58
TSEN54-201ENST00000333213 CNTN6Q9UQ52 1028 aa24.93■■□□□ 1.58
TSEN54-201ENST00000333213 ARL5CA6NH57 179 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 DCDC2CA8MYV0 355 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 WEE2P0C1S8 567 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ATICP31939 592 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ARHGAP25P42331 645 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 RAB27AP51159 221 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 CBX1P83916 185 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 NAB2Q15742 525 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 TCTN1Q2MV58 587 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 PLEKHG4Q58EX7 1191 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 SCARA5Q6ZMJ2 495 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ZNF598Q86UK7 904 aaKnown RBP24.92■■□□□ 1.58
TSEN54-201ENST00000333213 DBF4BQ8NFT6 615 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 BEST2Q8NFU1 509 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 SLC30A5Q8TAD4 765 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 NENFQ9UMX5 172 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 SCN1AP35498 2009 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 TET1Q8NFU7 2136 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ANO9A1A5B4 782 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 C9IYK1 514 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 KRT5P13647 590 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 IBSPP21815 317 aaPredicted RBP24.92■■□□□ 1.58
TSEN54-201ENST00000333213 LRRC26Q2I0M4 334 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 C9orf57Q5W0N0 161 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 DNAAF5Q86Y56 855 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ECHDC2Q86YB7 292 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 PALB2Q86YC2 1186 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 FMNL3Q8IVF7 1028 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 PPP1R12CQ9BZL4 782 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 SDCBP2Q9H190 292 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 C11orf49Q9H6J7 331 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 L2HGDHQ9H9P8 463 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 ATP11BQ9Y2G3 1177 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 GIT1Q9Y2X7 761 aa24.92■■□□□ 1.58
TSEN54-201ENST00000333213 CCDC172P0C7W6 258 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 CYP11B1P15538 503 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 CCL23P55773 120 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 ZNF667Q5HYK9 610 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 GLYCTKQ8IVS8 523 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 RNF169Q8NCN4 708 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 BCO2Q9BYV7 579 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 LACRTQ9GZZ8 138 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 LZTFL1Q9NQ48 299 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 TRIM10Q9UDY6 481 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 TBX21Q9UL17 535 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 PCDHA13Q9Y5I0 950 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 SCN5AQ14524 2016 aa24.91■■□□□ 1.58
TSEN54-201ENST00000333213 PIRO00625 290 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 SLU7O95391 586 aaKnown RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 STAU1O95793 577 aaKnown RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CHRNB2P17787 502 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CYP2C18P33260 490 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 RAP1GAPP47736 663 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CDH8P55286 799 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 KRT83P78385 493 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 TMEM270Q6UE05 265 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 HACE1Q8IYU2 909 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 DDX1Q92499 740 aaKnown RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 ZNF592Q92610 1267 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 TSPAN18Q96SJ8 248 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CISHQ9NSE2 258 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CACNG4Q9UBN1 327 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 NAGPAQ9UK23 515 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 PCDHB4Q9Y5E5 795 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 CD58P19256 250 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 IGFBP6P24592 240 aaPredicted RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 BMS1Q14692 1282 aaKnown RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 SPA17Q15506 151 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 AGPAT1Q99943 283 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 IRX2Q9BZI1 471 aaPredicted RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 TSPYL2Q9H2G4 693 aaPredicted RBP24.9■■□□□ 1.58
TSEN54-201ENST00000333213 SMYD3Q9H7B4 428 aa24.9■■□□□ 1.58
TSEN54-201ENST00000333213 SCNN1GP51170 649 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 ZNF132P52740 706 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 FAM189BP81408 668 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 SLC24A5Q71RS6 500 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 MCOLN1Q9GZU1 580 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 RSAD1Q9HA92 442 aa24.89■■□□□ 1.58
TSEN54-201ENST00000333213 TANC1Q9C0D5 1861 aa24.89■■□□□ 1.57
TSEN54-201ENST00000333213 CYP3A5P20815 502 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 TAF3Q5VWG9 929 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 DUSP10Q9Y6W6 482 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 SPTLC1O15269 473 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 IPO7O95373 1038 aaKnown RBP24.88■■□□□ 1.57
TSEN54-201ENST00000333213 MMEP08473 750 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 ANXA13P27216 316 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 MAGEA1P43355 309 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 VAV2P52735 878 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 RPUSD2Q8IZ73 545 aaKnown RBP24.88■■□□□ 1.57
TSEN54-201ENST00000333213 LRRC52Q8N7C0 313 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 RBBP8NLQ8NC74 664 aaPredicted RBP24.88■■□□□ 1.57
TSEN54-201ENST00000333213 VWCEQ96DN2 955 aa24.88■■□□□ 1.57
TSEN54-201ENST00000333213 FAXDC2Q96IV6 333 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms