RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 CLEC1BQ9P126 229 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ANKFY1Q9P2R3 1169 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ARIH1Q9Y4X5 557 aaPredicted RBP10.55□□□□□ -0.72
SYN3-201ENST00000332840 PCDHGC5Q9Y5F6 944 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 HCFC2Q9Y5Z7 792 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 ZDBF2Q9HCK1 2354 aa10.55□□□□□ -0.72
SYN3-201ENST00000332840 LGALS16A8MUM7 142 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PRR33A8MZF0 331 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PTGESO14684 152 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 LINC01565O15544 149 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 MBTPS2O43462 519 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 TADA2AO75478 443 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 GLP2RO95838 553 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PIGRP01833 764 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 EDN1P05305 212 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PRKCSHP14314 528 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 RPL13P26373 211 aaKnown RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 PBX1P40424 430 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 MATR3P43243 847 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYN3-201ENST00000332840 CASP5P51878 434 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 NHLH1Q02575 133 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 ITIH3Q06033 890 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 DLX2Q07687 328 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 MCL1Q07820 350 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 TBX2Q13207 712 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 ADAM9Q13443 819 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 KCNC3Q14003 757 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 NFIL3Q16649 462 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 IER5LQ5T953 404 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 CES5AQ6NT32 575 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 ANKRD54Q6NXT1 300 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 FUT10Q6P4F1 479 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 MAP4K3Q8IVH8 894 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 ADHFE1Q8IWW8 467 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 RNF168Q8IYW5 571 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 BCL7CQ8WUZ0 217 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 FBXL18Q96ME1 805 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 ZNF830Q96NB3 372 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 NECTIN4Q96NY8 510 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PHOX2BQ99453 314 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 PLEKHA5Q9HAU0 1116 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
SYN3-201ENST00000332840 TBX20Q9UMR3 447 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 EXOC7Q9UPT5 735 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.54□□□□□ -0.72
SYN3-201ENST00000332840 ITIH6Q6UXX5 1313 aa10.54□□□□□ -0.72
SYN3-201ENST00000332840 SMIM28A0A1B0GU29 152 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 A0A1W2PQC6 194 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CASTOR2A6NHX0 329 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 TMEM189-UBE2V1I3L0A0 370 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 PES1O00541 588 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 ABLIM1O14639 778 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 XPOTO43592 962 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 CLASP2O75122 1294 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 EFEMP2O95967 443 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 TPM1P09493 284 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CLTAP09496 248 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 KCNE1P15382 129 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 KLRC2P26717 231 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 RPL9P32969 192 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 HOXD13P35453 343 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 MARSP56192 900 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 GTF2BQ00403 316 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 POU5F1Q01860 360 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 DSG1Q02413 1049 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 UBXN1Q04323 297 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 ZP2Q05996 745 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 TRIM14Q14142 442 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CLUL1Q15846 466 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 MAN2A1Q16706 1144 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CCDC40Q4G0X9 1142 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 XKR4Q5GH76 650 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 FKBP15Q5T1M5 1219 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 SLFN12LQ6IEE8 588 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 DCLRE1AQ6PJP8 1040 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 MAMSTRQ6ZN01 415 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 HS2ST1Q7LGA3 356 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 ZBTB33Q86T24 672 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 GOLGA5Q8TBA6 731 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CACTINQ8WUQ7 758 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 SNX27Q96L92 541 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 RIPOR3Q96MK2 946 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 PPP1R10Q96QC0 940 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 ACCSQ96QU6 501 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 STRA6Q9BX79 667 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 VN1R3Q9BXE9 311 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 KCNF1Q9H3M0 494 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 TMEM206Q9H813 350 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 RXFP1Q9HBX9 757 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CHST7Q9NS84 486 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 MIOSQ9NXC5 875 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CNTN3Q9P232 1028 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
SYN3-201ENST00000332840 USP20Q9Y2K6 914 aa10.53□□□□□ -0.72
SYN3-201ENST00000332840 ZFHX2Q9C0A1 2572 aaPredicted RBP10.52□□□□□ -0.73
SYN3-201ENST00000332840 OGTO15294 1046 aa10.52□□□□□ -0.73
SYN3-201ENST00000332840 LILRB3O75022 631 aa10.52□□□□□ -0.73
SYN3-201ENST00000332840 PPP1R37O75864 691 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms