RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 BCO2Q9BYV7 579 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 NHEJ1Q9H9Q4 299 aaPredicted RBP12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 POLIQ9UNA4 740 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.96□□□□□ -0.33
TRIM49B-201ENST00000332682 SSU72P8A0A1W2PR75 194 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 POMCP01189 267 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 CSF2RAP15509 400 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 USP8P40818 1118 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 PTK2Q05397 1052 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 MYO1EQ12965 1108 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 ASTE1Q2TB18 679 aaPredicted RBP12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 MFSD5Q6N075 450 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF560Q96MR9 790 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 HAUS4Q9H6D7 363 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 SMYD3Q9H7B4 428 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 PCDH10Q9P2E7 1040 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 CACNG4Q9UBN1 327 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 CNTN6Q9UQ52 1028 aa12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 BZW2Q9Y6E2 419 aaKnown RBP12.95□□□□□ -0.34
TRIM49B-201ENST00000332682 CYP26A1O43174 497 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 NDUFA10O95299 355 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 CCDC172P0C7W6 258 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 KRT5P13647 590 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 P4HA1P13674 534 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 CLCN1P35523 988 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 PNPLA4P41247 253 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 TUSC3Q13454 348 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF571Q7Z3V5 609 aaPredicted RBP12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 CCDC170Q8IYT3 715 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 C17orf53Q8N3J3 647 aaPredicted RBP12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 OLIG1Q8TAK6 271 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 EPS8L1Q8TE68 723 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 CCDC42Q96M95 316 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 DESI2Q9BSY9 194 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 SYT11Q9BT88 431 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 SDCBP2Q9H190 292 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 CISHQ9NSE2 258 aa12.94□□□□□ -0.34
TRIM49B-201ENST00000332682 ESPNB1AK53 854 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SPTLC1O15269 473 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 WEE2P0C1S8 567 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CD58P19256 250 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 RAP1GAPP47736 663 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 TAF6P49848 677 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CLCNKBP51801 687 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 KIF11P52732 1056 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 ZNF132P52740 706 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 TNNC1P63316 161 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 IKBKEQ14164 716 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 NOMO2Q5JPE7 1267 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SMYD5Q6GMV2 418 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 TMEM270Q6UE05 265 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 TMEM199Q8N511 208 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CYP3A43Q9HB55 503 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 ACP6Q9NPH0 428 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SPTLC3Q9NUV7 552 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 NOCTQ9UK39 431 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 EPN1Q9Y6I3 576 aaPredicted RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CASTOR2A6NHX0 329 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 KPNA7A9QM74 516 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 EIF3CLB5ME19 914 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 PODXLO00592 558 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 AKR1B10O60218 316 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 B4GALT3O60512 393 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 PFKMP08237 780 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CYP11B1P15538 503 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 ANXA13P27216 316 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 RPL9P32969 192 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CYLC1P35663 651 aaPredicted RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 CDH8P55286 799 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 LILRA4P59901 499 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 YWHAEP62258 255 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 DSC1Q08554 894 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 UPP1Q16831 310 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SV2CQ496J9 727 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 NOP9Q86U38 636 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 NPAS4Q8IUM7 802 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 RBBP8NLQ8NC74 664 aaPredicted RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 C3orf58Q8NDZ4 430 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 ACRBPQ8NEB7 543 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 URGCPQ8TCY9 931 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SLC20A1Q8WUM9 679 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 EIF3CQ99613 913 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 PAAF1Q9BRP4 392 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 DEF6Q9H4E7 631 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 TBC1D13Q9NVG8 400 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 GDAP2Q9NXN4 497 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 LRFN2Q9ULH4 789 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 REXO2Q9Y3B8 237 aaKnown RBP12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 PCDHB4Q9Y5E5 795 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 SNX9Q9Y5X1 595 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 ADGRG1Q9Y653 693 aa12.93□□□□□ -0.34
TRIM49B-201ENST00000332682 COL4A6Q14031 1691 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms