RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 TLR9Q9NR96 1032 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 CHST7Q9NS84 486 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 GDAP2Q9NXN4 497 aa17.28■□□□□ 0.36
LRRC28-202ENST00000331450 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.28■□□□□ 0.36
LRRC28-202ENST00000331450 SMTNL1A8MU46 457 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 KPNA7A9QM74 516 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 TRAPPC3O43617 180 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 HLA-DRAP01903 254 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 ATICP31939 592 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 ERVFC1P60507 584 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 MYL6P60660 151 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 KCNH2Q12809 1159 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 NCOA4Q13772 614 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 MAN2A1Q16706 1144 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 MIIPQ5JXC2 388 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.27■□□□□ 0.36
LRRC28-202ENST00000331450 FAM200AQ8TCP9 573 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 HPDLQ96IR7 371 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 FAM161BQ96MY7 647 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 TUBGCP2Q9BSJ2 902 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 TSPY26PQ9H489 355 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 MMRN2Q9H8L6 949 aa17.27■□□□□ 0.36
LRRC28-202ENST00000331450 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
LRRC28-202ENST00000331450 PUF60Q9UHX1 559 aaKnown RBP17.27■□□□□ 0.36
LRRC28-202ENST00000331450 SYN3O14994 580 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 P4HA2O15460 535 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 N4BP1O75113 896 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 PHACTR2O75167 634 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 CTSAP10619 480 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 POU3F3P20264 500 aaPredicted RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 TKTP29401 623 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 IRS1P35568 1242 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 PIK3CAP42336 1068 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 MYL7Q01449 175 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 DSG1Q02413 1049 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 MYO1EQ12965 1108 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 TRPC3Q13507 836 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 ADGRE1Q14246 886 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 USP41Q3LFD5 358 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 RTP2Q5QGT7 225 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 FAM171A1Q5VUB5 890 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 APTXQ7Z2E3 356 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 LIMS2Q7Z4I7 341 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 LUZP1Q86V48 1076 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 GPR65Q8IYL9 337 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 SEMA4DQ92854 862 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 MRPL38Q96DV4 380 aaKnown RBP17.26■□□□□ 0.35
LRRC28-202ENST00000331450 B3GALT6Q96L58 329 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 SENP8Q96LD8 212 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 LMCD1Q9NZU5 365 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 PCDHB8Q9UN66 801 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 IRAK3Q9Y616 596 aa17.26■□□□□ 0.35
LRRC28-202ENST00000331450 LILRB3O75022 631 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 LRRN2O75325 713 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 CYP11A1P05108 521 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 GLUD2P49448 558 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 KRT31Q15323 416 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 PTPN14Q15678 1187 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 PDE12Q6L8Q7 609 aaKnown RBP17.25■□□□□ 0.35
LRRC28-202ENST00000331450 DEFB123Q8N688 67 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 PIK3R5Q8WYR1 880 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 TAF4BQ92750 862 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 GUCD1Q96NT3 240 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 TCF25Q9BQ70 676 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 LIMA1Q9UHB6 759 aaKnown RBP17.25■□□□□ 0.35
LRRC28-202ENST00000331450 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
LRRC28-202ENST00000331450 CDH23Q9H251 3354 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 URODP06132 367 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 ODC1P11926 461 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 ATP1A3P13637 1013 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 TYMPP19971 482 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 MRPL58Q14197 206 aaKnown RBP17.24■□□□□ 0.35
LRRC28-202ENST00000331450 PTPROQ16827 1216 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 ZNF699Q32M78 642 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 VWA3BQ502W6 1294 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 DSTYKQ6XUX3 929 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 LMO3Q8TAP4 145 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 AUTS2Q8WXX7 1259 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 TTPALQ9BTX7 342 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 NGRNQ9NPE2 291 aaKnown RBP17.24■□□□□ 0.35
LRRC28-202ENST00000331450 ENTPD7Q9NQZ7 604 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 RAB20Q9NX57 234 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 TAB2Q9NYJ8 693 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 L1RE1Q9UN81 338 aa17.24■□□□□ 0.35
LRRC28-202ENST00000331450 R3HCC1Q9Y3T6 440 aaKnown RBP17.24■□□□□ 0.35
LRRC28-202ENST00000331450 MTCL1Q9Y4B5 1905 aaKnown RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 GTPBP10A4D1E9 387 aaKnown RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 LRRC10BA6NIK2 292 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 BECN2A8MW95 431 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 CYB561D2O14569 222 aa17.23■□□□□ 0.35
LRRC28-202ENST00000331450 PRKCSHP14314 528 aaPredicted RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 NOP14P78316 857 aaKnown RBP17.23■□□□□ 0.35
LRRC28-202ENST00000331450 SMC1AQ14683 1233 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms