RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ZNF568Q3ZCX4 644 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 SYDE1Q6ZW31 735 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 TRIM50Q86XT4 487 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 ZNF606Q8WXB4 792 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 TMEM109Q9BVC6 243 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 MTMR12Q9C0I1 747 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 CNOT10Q9H9A5 744 aaKnown RBP15.49■□□□□ 0.07
TPM3-206ENST00000330188 AAASQ9NRG9 546 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 ASIC3Q9UHC3 531 aa15.49■□□□□ 0.07
TPM3-206ENST00000330188 ATXN2Q99700 1313 aaKnown RBP15.48■□□□□ 0.07
TPM3-206ENST00000330188 SBF1O95248 1867 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 IGKV6-21A0A0C4DH24 114 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 GMNCA6NCL1 334 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 OGTO15294 1046 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 LGR5O75473 907 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 RALAP11233 206 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 IVDP26440 423 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 MCL1Q07820 350 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 ADCY2Q08462 1091 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 HSDL1Q3SXM5 330 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 SPATS2Q86XZ4 545 aaKnown RBP15.48■□□□□ 0.07
TPM3-206ENST00000330188 CCDC50Q8IVM0 306 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 KATNAL2Q8IYT4 538 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 LRRC71Q8N4P6 559 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 RNF149Q8NC42 400 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 UHMK1Q8TAS1 419 aaKnown RBP15.48■□□□□ 0.07
TPM3-206ENST00000330188 FEZF2Q8TBJ5 459 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 GRK7Q8WTQ7 553 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 TCP11Q8WWU5 503 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 RAPGEF5Q92565 580 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 TCHPQ9BT92 498 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 ASCC2Q9H1I8 757 aaPredicted RBP15.48■□□□□ 0.07
TPM3-206ENST00000330188 ELP3Q9H9T3 547 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 ANK1P16157 1881 aa15.48■□□□□ 0.07
TPM3-206ENST00000330188 TLDC2A0PJX2 215 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 TLR3O15455 904 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 GAS2O43903 313 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 PGK2P07205 417 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 SRGAP2CP0DJJ0 459 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 ITIH2P19823 946 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 MMP8P22894 467 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 MYL6P60660 151 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 C6orf118Q5T5N4 469 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 ZBTB8OSQ8IWT0 167 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 OTUD5Q96G74 571 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 SNF8Q96H20 258 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 HEMGNQ9BXL5 484 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 PARVAQ9NVD7 372 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 CPSF3Q9UKF6 684 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 MGAMO43451 1857 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 A0A087WUV0 522 aaPredicted RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 RGS16O15492 202 aaPredicted RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 SLC25A27O95847 323 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 MXD4Q14582 209 aaPredicted RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 MAPK6Q16659 721 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 CELF3Q5SZQ8 465 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 TRMT10CQ7L0Y3 403 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 ANKS1BQ7Z6G8 1248 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 CROCCP2Q86T23 111 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 CCDC25Q86WR0 208 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 C3orf20Q8ND61 904 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 ATL2Q8NHH9 583 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 MDM1Q8TC05 714 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 EPS8L3Q8TE67 593 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 FAM212AQ96EL1 285 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 CDC42EP4Q9H3Q1 356 aaKnown RBP15.47■□□□□ 0.07
TPM3-206ENST00000330188 USTQ9Y2C2 406 aa15.47■□□□□ 0.07
TPM3-206ENST00000330188 MCM3APO60318 1980 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 SMIM23A6NLE4 172 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 DDNO94850 711 aaPredicted RBP15.46■□□□□ 0.07
TPM3-206ENST00000330188 AGTP01019 485 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 CHKAP35790 457 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 PLCB4Q15147 1175 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 PLPPR4Q7Z2D5 763 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 EXD1Q8NHP7 514 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 CCDC114Q96M63 670 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 OSBPL8Q9BZF1 889 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 NIF3L1Q9GZT8 377 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 ADAM7Q9H2U9 754 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 TXNRD2Q9NNW7 524 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 HOMER3Q9NSC5 361 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 IP6K2Q9UHH9 426 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 NEU2Q9Y3R4 380 aa15.46■□□□□ 0.07
TPM3-206ENST00000330188 TCRBV5S1A1TA0A578 114 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 NOP56O00567 594 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 GAS8O95995 478 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 CD58P19256 250 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 PROZP22891 400 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 BRD2P25440 801 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 NF2P35240 595 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 MMP13P45452 471 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 IREB2P48200 963 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 RPL7AP62424 266 aaKnown RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 IFI35P80217 286 aaPredicted RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 SURF1Q15526 300 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 TRIP13Q15645 432 aaPredicted RBP15.46■□□□□ 0.06
TPM3-206ENST00000330188 CCNG2Q16589 344 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 DUOXA2Q1HG44 320 aa15.46■□□□□ 0.06
TPM3-206ENST00000330188 TNFAIP8L3Q5GJ75 292 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms