RNA–Protein interactions for RNA: ENST00000327908.3

LRIT3-201, Transcript of leucine rich repeat, Ig-like and transmembrane domains 3, humanhuman

TSL 2 BASIC

Gene LRIT3, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT3-201ENST00000327908 PDCD11Q14690 1871 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CLUHO75153 1309 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 MGEA5O60502 916 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 POU3F3P20264 500 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 HOXA9P31269 272 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 MAGEA11P43364 429 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ACADSBP45954 432 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TUFMP49411 452 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ACOT2P49753 483 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 NDUFV1P49821 464 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 BCAR1P56945 870 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 STX17P56962 302 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 NOP14P78316 857 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 UBXN1Q04323 297 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 E2F5Q15329 346 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CRELD2Q6UXH1 353 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ITIH5Q86UX2 942 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CRIPAKQ8N1N5 446 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 C18orf25Q96B23 403 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 IGSF21Q96ID5 467 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 SPAG5Q96R06 1193 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 GAS2L1Q99501 681 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TTPALQ9BTX7 342 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 PNPLA8Q9NP80 782 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 RTN4Q9NQC3 1192 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 GCNT4Q9P109 453 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 UXTQ9UBK9 157 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 APEX2Q9UBZ4 518 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TTC3P53804 2025 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 KPNA7A9QM74 516 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 LSM8O95777 96 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ERBB2P04626 1255 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 HNRNPA1P09651 372 aaKnown RBP eCLIP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CTSAP10619 480 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CASP1P29466 404 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 OR1G1P47890 313 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 VEPH1Q14D04 833 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CLLU1OSQ5K130 101 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 PPP2R2DQ66LE6 453 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 FUT10Q6P4F1 479 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 C11orf57Q6ZUT1 292 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 SV2AQ7L0J3 742 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 DHX40Q8IX18 779 aaKnown RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CASP10Q92851 521 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CCDC127Q96BQ5 260 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 ACBD6Q9BR61 282 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 STK33Q9BYT3 514 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 PLEKHA4Q9H4M7 779 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 NRDE2Q9H7Z3 1164 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 RXFP1Q9HBX9 757 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 HESX1Q9UBX0 185 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 BARX2Q9UMQ3 279 aaPredicted RBP5.54□□□□□ -1.52
LRIT3-201ENST00000327908 CITO14578 2027 aa5.54□□□□□ -1.52
LRIT3-201ENST00000327908 TRIM66O15016 1216 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ZNF189O75820 626 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 GALTP07902 379 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 KRT19P08727 400 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 VDRP11473 427 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 BMP6P22004 513 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 FGFR4P22455 802 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 POLR2BP30876 1174 aaKnown RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ELF1P32519 619 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 DSG1Q02413 1049 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 PTK2Q05397 1052 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 INCA1Q0VD86 236 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 GPNMBQ14956 572 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 UPP1Q16831 310 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 VSTM1Q6UX27 236 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 OTOP2Q7RTS6 562 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 CHAMP1Q96JM3 812 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ZBTB45Q96K62 511 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 NT5C1AQ9BXI3 368 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 BCO2Q9BYV7 579 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 TRIM5Q9C035 493 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ELOVL4Q9GZR5 314 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 PDE11AQ9HCR9 933 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 FANCLQ9NW38 375 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 MAPK8IP1Q9UQF2 711 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 GOLGA8IPA6NC78 632 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 GOLGA8JA6NMD2 632 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 H3BNC9 293 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 PTGESO14684 152 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 OAZ2O95190 189 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 HOXB8P17481 243 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 FGFR3P22607 806 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 SCNN1AP37088 669 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ZBED6P86452 979 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 CDK17Q00537 523 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 CUL2Q13617 745 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 NCAPHQ15003 741 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 RTN4RL1Q86UN2 441 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 SMYD4Q8IYR2 804 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 ADGRF2Q8IZF7 708 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 PDZD8Q8NEN9 1154 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 CMASQ8NFW8 434 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 OVCA2Q8WZ82 227 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 IRX2Q9BZI1 471 aaPredicted RBP5.53□□□□□ -1.52
LRIT3-201ENST00000327908 MTRRQ9UBK8 725 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 CYB561D2O14569 222 aa5.53□□□□□ -1.52
LRIT3-201ENST00000327908 XYLBO75191 536 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms