RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 GPS1Q13098 491 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 KLF1Q13351 362 aaPredicted RBP15.46■□□□□ 0.07
SSBP3-201ENST00000326956 MOGSQ13724 837 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 MUM1Q2TAK8 710 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 WASHC2DQ5SRD0 308 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 ZNF677Q86XU0 584 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 CCDC125Q86Z20 511 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 ZBED8Q8IZ13 594 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 ADAM33Q9BZ11 813 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 KMT5AQ9NQR1 393 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 ADAMTSL1Q8N6G6 1762 aa15.46■□□□□ 0.07
SSBP3-201ENST00000326956 LRRD1A4D1F6 860 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 DNALI1O14645 258 aaPredicted RBP15.46■□□□□ 0.06
SSBP3-201ENST00000326956 PDHA1P08559 390 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 TPBGLP0DKB5 382 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 ADSSP30520 456 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 GRIK3Q13003 919 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 TAF1BQ53T94 588 aaPredicted RBP15.46■□□□□ 0.06
SSBP3-201ENST00000326956 PASD1Q8IV76 773 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 KATNAL2Q8IYT4 538 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 EXD1Q8NHP7 514 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 KIFC3Q9BVG8 833 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 MRIQ9BWK5 157 aa15.46■□□□□ 0.06
SSBP3-201ENST00000326956 ENO4A6NNW6 628 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 PI4K2BG5E9Z4 385 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 POLRMTO00411 1230 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 LMNAP02545 664 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 NEFHP12036 1026 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 ALDH1B1P30837 517 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 GTF2H1P32780 548 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 TAS2R40P59535 323 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 LVRNQ6Q4G3 990 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 CENPUQ71F23 418 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 NLRP9Q7RTR0 991 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 RANBP17Q9H2T7 1088 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 NPHS2Q9NP85 383 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 EURLQ9NYK6 297 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 LRRC42Q9Y546 428 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 HNRNPDLO14979 420 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 TLR3O15455 904 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 IFNB1P01574 187 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 FDX1P10109 184 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 GNAZP19086 355 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 PTPN4P29074 926 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 ABL2P42684 1182 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 MRPS35P82673 323 aaKnown RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 TDRPQ86YL5 185 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 DENND1AQ8TEH3 1009 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 FNBP1Q96RU3 617 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 TMOD2Q9NZR1 351 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 PSMC3IPQ9P2W1 217 aaPredicted RBP15.45■□□□□ 0.06
SSBP3-201ENST00000326956 SYNPO2Q9UMS6 1093 aa15.45■□□□□ 0.06
SSBP3-201ENST00000326956 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 WDR91A4D1P6 747 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 NPM3O75607 178 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 NPR1P16066 1061 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 PECAM1P16284 738 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 KLRC2P26717 231 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 MARK3P27448 753 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 SESN3P58005 492 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 MXRA7P84157 204 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 CYP24A1Q07973 514 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 NFX1Q12986 1120 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 STRIP1Q5VSL9 837 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 CDCA2Q69YH5 1023 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 RGS9BPQ6ZS82 235 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 RBM41Q96IZ5 413 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 CCPG1Q9ULG6 757 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ZMYND8Q9ULU4 1186 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 TMX2Q9Y320 296 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 MYPNQ86TC9 1320 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ENTPD3O75355 529 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 TJP3O95049 919 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 KRT10P13645 584 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 TNNI1P19237 187 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 NPTX2P47972 431 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 SLC18A1P54219 525 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ZBTB16Q05516 673 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 PDIA2Q13087 525 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ZRSR2Q15696 482 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 SLC1A5Q15758 541 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 BRDTQ58F21 947 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 SLC45A4Q5BKX6 768 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 PLA2G4FQ68DD2 849 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ANKS1BQ7Z6G8 1248 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 FAM160B2Q86V87 743 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 MAP4K3Q8IVH8 894 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 C10orf82Q8WW14 230 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 DNAJC9Q8WXX5 260 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 FHDC1Q9C0D6 1143 aaPredicted RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 DCLRE1BQ9H816 532 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 PPCSQ9HAB8 311 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 DCTN4Q9UJW0 460 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 DNPEPQ9ULA0 475 aa15.44■□□□□ 0.06
SSBP3-201ENST00000326956 HNRNPCL1O60812 293 aaKnown RBP15.44■□□□□ 0.06
SSBP3-201ENST00000326956 ZC3H11AO75152 810 aaKnown RBP eCLIP15.44■□□□□ 0.061e-8■□□□□ 9.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms