RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.72■□□□□ 0.43
SSH1-201ENST00000326470 DPPA5A6NC42 116 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 ACADSP16219 412 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 CA4P22748 312 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 GTF2H1P32780 548 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 PTDSS1P48651 473 aaKnown RBP17.72■□□□□ 0.43
SSH1-201ENST00000326470 GCNT1Q02742 428 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 SLC1A5Q15758 541 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 ENOSF1Q7L5Y1 443 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 CCDC125Q86Z20 511 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 C4orf33Q8N1A6 199 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 OGFOD1Q8N543 542 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 ELMO3Q96BJ8 720 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 LNPEPQ9UIQ6 1025 aa17.72■□□□□ 0.43
SSH1-201ENST00000326470 EME2A4GXA9 379 aaPredicted RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 ENO4A6NNW6 628 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 G3V3G9 751 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 C2CD2LO14523 706 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 DNALI1O14645 258 aaPredicted RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 TYROBPO43914 113 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 LMNAP02545 664 aaKnown RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 TAS2R40P59535 323 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 CCDC142Q17RM4 750 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 TAF1BQ53T94 588 aaPredicted RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 LLGL2Q6P1M3 1020 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 OTOAQ7RTW8 1153 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 ZNF677Q86XU0 584 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 EXD1Q8NHP7 514 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 TTC8Q8TAM2 541 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 SAR1AQ9NR31 198 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 EXOC7Q9UPT5 735 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 EIF4E1BA6NMX2 242 aaKnown RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 HNRNPCL1O60812 293 aaKnown RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 ITGB5P18084 799 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 CTCFP49711 727 aaPredicted RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
SSH1-201ENST00000326470 RASA2Q15283 850 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 SV2AQ7L0J3 742 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 ZNF398Q8TD17 642 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 MFSD14AQ96MC6 490 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 SH3GL3Q99963 347 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 RANBP17Q9H2T7 1088 aaKnown RBP17.71■□□□□ 0.43
SSH1-201ENST00000326470 DCLRE1BQ9H816 532 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 PPCSQ9HAB8 311 aa17.71■□□□□ 0.43
SSH1-201ENST00000326470 ENTPD5O75356 428 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 MARK3P27448 753 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 CNGA1P29973 690 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 NSFP46459 744 aaKnown RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 TSNAXIP1Q2TAA8 658 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 C2CD6Q53TS8 623 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 HHATQ5VTY9 493 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 MON1BQ7L1V2 547 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 NLRP9Q7RTR0 991 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 APLFQ8IW19 511 aaPredicted RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 SUPT20HQ8NEM7 779 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 DNAJC9Q8WXX5 260 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 ZNF75CPQ92670 426 aaPredicted RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 TIPINQ9BVW5 301 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 GPRC5CQ9NQ84 441 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 PKD2L1Q9P0L9 805 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 ZFP69BQ9UJL9 534 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 TBX20Q9UMR3 447 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.7■□□□□ 0.42
SSH1-201ENST00000326470 PCDHB2Q9Y5E7 798 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 H0Y3Z8 333 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 PLSCR1O15162 318 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 DHX15O43143 795 aaKnown RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 LYPLA2O95372 231 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 CYP1A1P04798 512 aaPredicted RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 RXRBP28702 533 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 ECE1P42892 770 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 QARSP47897 775 aaKnown RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 LBRQ14739 615 aaKnown RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 FASTKD3Q14CZ7 662 aaKnown RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 RBBP8NLQ8NC74 664 aaPredicted RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 CFAP61Q8NHU2 1237 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 FHDC1Q9C0D6 1143 aaPredicted RBP17.7■□□□□ 0.42
SSH1-201ENST00000326470 KCNH7Q9NS40 1196 aa17.7■□□□□ 0.42
SSH1-201ENST00000326470 LIASO43766 372 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 FESP07332 822 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 FGFR1P11362 822 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 PECAM1P16284 738 aaPredicted RBP17.69■□□□□ 0.42
SSH1-201ENST00000326470 CD58P19256 250 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 CTC1Q2NKJ3 1217 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 SGSM1Q2NKQ1 1148 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 TBC1D10BQ4KMP7 808 aaPredicted RBP17.69■□□□□ 0.42
SSH1-201ENST00000326470 USP37Q86T82 979 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 MAP4K3Q8IVH8 894 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 GLIS1Q8NBF1 620 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 SPDYE1Q8NFV5 336 aaPredicted RBP17.69■□□□□ 0.42
SSH1-201ENST00000326470 FBXL18Q96ME1 805 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 SH2D3AQ9BRG2 576 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 VPS37BQ9H9H4 285 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 SLC24A2Q9UI40 661 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 LRRD1A4D1F6 860 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 ALOX15BO15296 676 aa17.69■□□□□ 0.42
SSH1-201ENST00000326470 AHCYL1O43865 530 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms