RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 TKFCQ3LXA3 575 aa22.04■■□□□ 1.12
RNF40-201ENST00000324685 C4orf33Q8N1A6 199 aa22.04■■□□□ 1.12
RNF40-201ENST00000324685 SH2D3CQ8N5H7 860 aa22.04■■□□□ 1.12
RNF40-201ENST00000324685 OLFML3Q9NRN5 406 aa22.04■■□□□ 1.12
RNF40-201ENST00000324685 ATF5Q9Y2D1 282 aaPredicted RBP22.04■■□□□ 1.12
RNF40-201ENST00000324685 A2ML1A8K2U0 1454 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 PHF20L1A8MW92 1017 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 TMEM132DQ14C87 1099 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 C6orf10Q5SRN2 563 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 JAMLQ86YT9 394 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SYNE4Q8N205 404 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 FAM162AQ96A26 154 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SNRPAP09012 282 aaKnown RBP22.03■■□□□ 1.12
RNF40-201ENST00000324685 TMEM253P0C7T8 217 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 DEPDC1Q5TB30 811 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 CCDC78A2IDD5 438 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 FMR1Q06787 632 aaKnown RBP eCLIP22.03■■□□□ 1.124e-6■■■□□ 16.3
RNF40-201ENST00000324685 NCOA4Q13772 614 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SNX17Q15036 470 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 KIZQ2M2Z5 673 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 COBLL1Q53SF7 1204 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 KDELC2Q7Z4H8 507 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SCFD2Q8WU76 684 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 AGAP3Q96P47 875 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 REEP2Q9BRK0 252 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 WEE2P0C1S8 567 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 ERP27Q96DN0 273 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 PIN4Q9Y237 131 aaKnown RBP22.03■■□□□ 1.12
RNF40-201ENST00000324685 IL18RAPO95256 599 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 MYCP01106 439 aaPredicted RBP22.03■■□□□ 1.12
RNF40-201ENST00000324685 GSNP06396 782 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SKOR1P84550 965 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 RGL1Q9NZL6 768 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 SATB2Q9UPW6 733 aa22.03■■□□□ 1.12
RNF40-201ENST00000324685 MYO1GB0I1T2 1018 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 ACADSBP45954 432 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 FOXO4P98177 505 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 SNRNP35Q16560 246 aaKnown RBP22.02■■□□□ 1.12
RNF40-201ENST00000324685 PLEKHM3Q6ZWE6 761 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 SLC7A5P2Q9GIP4 190 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 PSD3Q9NYI0 1048 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 MPP6Q9NZW5 540 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 LSM7Q9UK45 103 aaKnown RBP22.02■■□□□ 1.12
RNF40-201ENST00000324685 ARHGEF40Q8TER5 1519 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 PDS5AQ29RF7 1337 aaKnown RBP22.02■■□□□ 1.12
RNF40-201ENST00000324685 ZNF677Q86XU0 584 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 RSAD1Q9HA92 442 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 RBM12Q9NTZ6 932 aaKnown RBP22.02■■□□□ 1.12
RNF40-201ENST00000324685 C20orf96Q9NUD7 363 aaPredicted RBP22.02■■□□□ 1.12
RNF40-201ENST00000324685 EIF3DO15371 548 aaKnown RBP eCLIP22.02■■□□□ 1.12
RNF40-201ENST00000324685 POLBP06746 335 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 DNAJC9Q8WXX5 260 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 KCNF1Q9H3M0 494 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 GRID1Q9ULK0 1009 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 CDY2AQ9Y6F7 541 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 CDY1Q9Y6F8 540 aa22.02■■□□□ 1.12
RNF40-201ENST00000324685 MAGEA4P43358 317 aa22.02■■□□□ 1.11
RNF40-201ENST00000324685 TNPO2O14787 897 aaKnown RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 DEFA1P59665 94 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 DEFA3P59666 94 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 RUNX1T1Q06455 604 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 PDK1Q15118 436 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 TMEM154Q6P9G4 183 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 SP8Q8IXZ3 490 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 ISCUQ9H1K1 167 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 SLC30A1Q9Y6M5 507 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 CACNB2Q08289 660 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 MEI1Q5TIA1 1274 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 C9orf72Q96LT7 481 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 THTPAQ9BU02 230 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 RIC8BQ9NVN3 520 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 SCN3BQ9NY72 215 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 MBD5Q9P267 1494 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 SUPT3HB4E1H0 165 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 CYP19A1P11511 503 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 CENPPQ6IPU0 288 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 FAM84BQ96KN1 310 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 PRR23D1E9PI22 279 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 P4HA2O15460 535 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 RAD51CO43502 376 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 PRR23D2P0DMB1 279 aaPredicted RBP22.01■■□□□ 1.11
RNF40-201ENST00000324685 CD274Q9NZQ7 290 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 SEPT3Q9UH03 358 aa22.01■■□□□ 1.11
RNF40-201ENST00000324685 STK25O00506 426 aa22■■□□□ 1.11
RNF40-201ENST00000324685 RFC5P40937 340 aa22■■□□□ 1.11
RNF40-201ENST00000324685 WLSQ5T9L3 541 aa22■■□□□ 1.11
RNF40-201ENST00000324685 KCTD17Q8N5Z5 321 aa22■■□□□ 1.11
RNF40-201ENST00000324685 SHCBP1Q8NEM2 672 aa22■■□□□ 1.11
RNF40-201ENST00000324685 OR6J1Q8NGC5 347 aa22■■□□□ 1.11
RNF40-201ENST00000324685 VPS33BQ9H267 617 aa22■■□□□ 1.11
RNF40-201ENST00000324685 SNX9Q9Y5X1 595 aa22■■□□□ 1.11
RNF40-201ENST00000324685 SNAP23O00161 211 aa22■■□□□ 1.11
RNF40-201ENST00000324685 HSPA13P48723 471 aa22■■□□□ 1.11
RNF40-201ENST00000324685 CHMP2BQ9UQN3 213 aa22■■□□□ 1.11
RNF40-201ENST00000324685 SYCP2LQ5T4T6 812 aa22■■□□□ 1.11
RNF40-201ENST00000324685 HORMAD1Q86X24 394 aa22■■□□□ 1.11
RNF40-201ENST00000324685 CLCA2Q9UQC9 943 aa22■■□□□ 1.11
RNF40-201ENST00000324685 LZTS1Q9Y250 596 aa22■■□□□ 1.11
RNF40-201ENST00000324685 PKP3Q9Y446 797 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms