RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 RFPL3O75679 317 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 FGRP09769 529 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 EXOSC10Q01780 885 aaKnown RBP7.41□□□□□ -1.22
CSTF3-201ENST00000323959 ILKQ13418 452 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 PSMD5Q16401 504 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 RASEFQ8IZ41 740 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 RFFLQ8WZ73 363 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 PCYT2Q99447 389 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 IL17RBQ9NRM6 502 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 THG1LQ9NWX6 298 aaKnown RBP7.41□□□□□ -1.22
CSTF3-201ENST00000323959 LIMCH1Q9UPQ0 1083 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 PRG3Q9Y2Y8 225 aaPredicted RBP7.41□□□□□ -1.22
CSTF3-201ENST00000323959 CYP46A1Q9Y6A2 500 aa7.41□□□□□ -1.22
CSTF3-201ENST00000323959 ANK1P16157 1881 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 KCNA2P16389 499 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 OR1G1P47890 313 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 MRPS9P82933 396 aaKnown RBP7.4□□□□□ -1.22
CSTF3-201ENST00000323959 FBXL19Q6PCT2 694 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 TMX3Q96JJ7 454 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 FAM20AQ96MK3 541 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 STRBPQ96SI9 672 aaKnown RBP7.4□□□□□ -1.22
CSTF3-201ENST00000323959 MAP7D2Q96T17 732 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 RSAD1Q9HA92 442 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 FAM105AQ9NUU6 356 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.22
CSTF3-201ENST00000323959 NFE2L3Q9Y4A8 694 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 TELO2Q9Y4R8 837 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 MYH6P13533 1939 aa7.4□□□□□ -1.22
CSTF3-201ENST00000323959 ADRA1BP35368 520 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 CDC42EP1Q00587 391 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 SP4Q02446 784 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 CACNB1Q02641 598 aaPredicted RBP7.4□□□□□ -1.23
CSTF3-201ENST00000323959 SGO2Q562F6 1265 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 CCDC81Q6ZN84 652 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 ARID3BQ8IVW6 561 aaPredicted RBP7.4□□□□□ -1.23
CSTF3-201ENST00000323959 CNNM3Q8NE01 707 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 LPPQ93052 612 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 MIB2Q96AX9 1013 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 LLPHQ9BRT6 129 aaKnown RBP7.4□□□□□ -1.23
CSTF3-201ENST00000323959 SLC25A18Q9H1K4 315 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 FTSJ1Q9UET6 329 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 MAFFQ9ULX9 164 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 MMP17Q9ULZ9 603 aa7.4□□□□□ -1.23
CSTF3-201ENST00000323959 SF3B1O75533 1304 aaKnown RBP eCLIP7.4□□□□□ -1.237e-8■■■■■ 37.5
CSTF3-201ENST00000323959 RELNP78509 3460 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 A0A1B0GTW7 788 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 TSPY2A6NKD2 308 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 GCOM1H8Y6P7 765 aaPredicted RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 M0R2C6 588 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 MAGEB2O15479 319 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 PAPSS1O43252 624 aaPredicted RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 POLR2MP0CAP2 368 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ARL13BQ3SXY8 428 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 SYCP2LQ5T4T6 812 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ANO7Q6IWH7 933 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 SPNS3Q6ZMD2 512 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 GLYCTKQ8IVS8 523 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 LINC01465Q8N7H1 131 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 MDGA1Q8NFP4 955 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 RSPRY1Q96DX4 576 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 GEMIN8Q9NWZ8 242 aaKnown RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 CILPO75339 1184 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 C22orf31O95567 290 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 TDO2P48775 406 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 NEK4P51957 841 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 SRSF11Q05519 484 aaKnown RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ELAVL2Q12926 359 aaKnown RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 MYO1EQ12965 1108 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 WDR45BQ5MNZ6 344 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 PCNX4Q63HM2 1172 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ELMOD1Q8N336 334 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 TCEAL4Q96EI5 215 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ZSWIM3Q96MP5 696 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 NIFKQ9BYG3 293 aaKnown RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ADAM28Q9UKQ2 775 aa7.39□□□□□ -1.23
CSTF3-201ENST00000323959 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.39□□□□□ -1.23
CSTF3-201ENST00000323959 PALM3A6NDB9 673 aaPredicted RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 PATL2C9JE40 543 aaKnown RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 OPLAHO14841 1288 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 MOSPD3O75425 235 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 CYP21A2P08686 494 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF33AQ06730 810 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 IGFBP7Q16270 282 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 QRICH1Q2TAL8 776 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 RRP12Q5JTH9 1297 aaKnown RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 HES3Q5TGS1 186 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 STK11IPQ8N1F8 1099 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 SPRYD3Q8NCJ5 442 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 ZNF274Q96GC6 653 aaPredicted RBP7.38□□□□□ -1.23
CSTF3-201ENST00000323959 TMEM47Q9BQJ4 181 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 CORO1BQ9BR76 489 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 AMNQ9BXJ7 453 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 DONSONQ9NYP3 566 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 GTSE1Q9NYZ3 720 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 TBX20Q9UMR3 447 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 DDX11L8A8MPP1 907 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 DPYSL4O14531 572 aa7.38□□□□□ -1.23
CSTF3-201ENST00000323959 SYNCRIPO60506 623 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms