RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SQORQ9Y6N5 450 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 SIGLEC1Q9BZZ2 1709 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 PSTPIP1O43586 416 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 C4BPBP20851 252 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 HIBADHP31937 336 aaKnown RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 HSPA2P54652 639 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 TXNRD1Q16881 649 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 RNF43Q68DV7 783 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 RRN3Q9NYV6 651 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 DUSP10Q9Y6W6 482 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 TAF4O00268 1085 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 BIRC5O15392 142 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 PDE8BO95263 885 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 IL2RBP14784 551 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 CDC25CP30307 473 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 KRT6CP48668 564 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 PRAMEP78395 509 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 LRRC24Q50LG9 513 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 CYB5R4Q7L1T6 521 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 RMND5BQ96G75 393 aaPredicted RBP7.4□□□□□ -1.23
SMC1A-201ENST00000322213 APEX2Q9UBZ4 518 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 TAF1P21675 1872 aa7.4□□□□□ -1.23
SMC1A-201ENST00000322213 NPEPPSP55786 919 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 FIGNQ5HY92 759 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PCYOX1LQ8NBM8 494 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PAGR1Q9BTK6 254 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PARVAQ9NVD7 372 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 MPP6Q9NZW5 540 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 CNOT8Q9UFF9 292 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TMED5Q9Y3A6 229 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 CAPN6Q9Y6Q1 641 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ARHGEF37A1IGU5 675 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PJA2O43164 708 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 GSNP06396 782 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PEX5P50542 639 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 EFHC1Q5JVL4 640 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PPP1R18Q6NYC8 613 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 UBE2Q1Q7Z7E8 422 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PRUNE1Q86TP1 453 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TLK2Q86UE8 772 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TBC1D10CQ8IV04 446 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SEL1LQ9UBV2 794 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PCDHA1Q9Y5I3 950 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SCN3AQ9NY46 2000 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 FOSP01100 380 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 KCNJ2P63252 427 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 C16orf72Q14CZ0 275 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TMC4Q7Z404 712 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF786Q8N393 782 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 RIN3Q8TB24 985 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 HEY2Q9UBP5 337 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 HPSEQ9Y251 543 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 FIS1Q9Y3D6 152 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 NBPF26B4DH59 902 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 FCER1AP12319 257 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TBXAS1P24557 533 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ITGA8P53708 1063 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SCYL2Q6P3W7 929 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 C4orf33Q8N1A6 199 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TEKT3Q9BXF9 490 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PCDH18Q9HCL0 1135 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 NMRK1Q9NWW6 199 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 RSL24D1Q9UHA3 163 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 FCGR1AP12314 374 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ENOSF1Q7L5Y1 443 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 RCOR2Q8IZ40 523 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SUPT20HQ8NEM7 779 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM79Q9BSE2 394 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 C20orf96Q9NUD7 363 aaPredicted RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 GTSE1Q9NYZ3 720 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 MYRFQ9Y2G1 1151 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 CTDNEP1O95476 244 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 UCHL3P15374 230 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 MCAMP43121 646 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 NSMFQ6X4W1 530 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 C3orf62Q6ZUJ4 267 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 BARHL2Q9NY43 387 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 KNTC1P50748 2209 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SCN5AQ14524 2016 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 DIP2AQ14689 1571 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 WNK3Q9BYP7 1800 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 SCNN1BP51168 640 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 MEI1Q5TIA1 1274 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PI16Q6UXB8 463 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 METTL13Q8N6R0 699 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 C1orf131Q8NDD1 294 aaKnown RBP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 HSPH1Q92598 858 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 GRIP2Q9C0E4 1043 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PIK3C2AO00443 1686 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PLEKHA8P1O95397 391 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ATP2B4P23634 1241 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 MAGEA4P43358 317 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 TSPY1Q01534 308 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 GRIK3Q13003 919 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 EDRF1Q3B7T1 1238 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 ERICH1Q86X53 443 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 DDX42Q86XP3 938 aaKnown RBP eCLIP7.39□□□□□ -1.23
SMC1A-201ENST00000322213 PPM1NQ8N819 430 aa7.39□□□□□ -1.23
SMC1A-201ENST00000322213 OXER1Q8TDS5 423 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms