RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 IRF7Q92985 503 aa15.52■□□□□ 0.08
RPP40-201ENST00000319533 ZSWIM3Q96MP5 696 aa15.52■□□□□ 0.08
RPP40-201ENST00000319533 PNMA5Q96PV4 448 aa15.52■□□□□ 0.08
RPP40-201ENST00000319533 HINFPQ9BQA5 517 aa15.52■□□□□ 0.08
RPP40-201ENST00000319533 TRMT61BQ9BVS5 477 aaKnown RBP15.52■□□□□ 0.08
RPP40-201ENST00000319533 OXCT2Q9BYC2 517 aaPredicted RBP15.52■□□□□ 0.08
RPP40-201ENST00000319533 ZNF334Q9HCZ1 680 aaPredicted RBP15.52■□□□□ 0.08
RPP40-201ENST00000319533 KCND2Q9NZV8 630 aa15.52■□□□□ 0.08
RPP40-201ENST00000319533 TTC26A0AVF1 554 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 MED19A0JLT2 244 aaPredicted RBP15.51■□□□□ 0.07
RPP40-201ENST00000319533 TDGF1P13385 188 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 PSMC3P17980 439 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 CYP3A5P20815 502 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 MCM4P33991 863 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 MLLT6P55198 1093 aaPredicted RBP15.51■□□□□ 0.07
RPP40-201ENST00000319533 ATP2C1P98194 919 aaPredicted RBP15.51■□□□□ 0.07
RPP40-201ENST00000319533 TWF1Q12792 350 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 MTAPQ13126 283 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 GRM2Q14416 872 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 IQCEQ6IPM2 695 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 VITQ6UXI7 678 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 HS6ST3Q8IZP7 471 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 DEPDC1BQ8WUY9 529 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 ZNF512Q96ME7 567 aaPredicted RBP15.51■□□□□ 0.07
RPP40-201ENST00000319533 LRRC3Q9BY71 257 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 HAPLN2Q9GZV7 340 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 CHRDQ9H2X0 955 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 BRD9Q9H8M2 597 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 TUBGCP4Q9UGJ1 667 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 NCOR2Q9Y618 2525 aa15.51■□□□□ 0.07
RPP40-201ENST00000319533 ARNTLO00327 626 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 CLDN3O15551 220 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 VNN2O95498 520 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 ADRB2P07550 413 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 CLTAP09496 248 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 SMTNP53814 917 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 SLC12A3P55017 1021 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 SEZ6Q53EL9 994 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 RNF19BQ6ZMZ0 732 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 GPR88Q9GZN0 384 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 ASAH2Q9NR71 780 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 ANKFY1Q9P2R3 1169 aa15.5■□□□□ 0.07
RPP40-201ENST00000319533 SMG5Q9UPR3 1016 aaKnown RBP15.5■□□□□ 0.07
RPP40-201ENST00000319533 NCANO14594 1321 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 CXCL8P10145 99 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 HARSP12081 509 aaKnown RBP15.49■□□□□ 0.07
RPP40-201ENST00000319533 TGM1P22735 817 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 MARCKSP29966 332 aaPredicted RBP15.49■□□□□ 0.07
RPP40-201ENST00000319533 NCKAP1LP55160 1127 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 YWHAHQ04917 246 aaPredicted RBP15.49■□□□□ 0.07
RPP40-201ENST00000319533 RILPL1Q5EBL4 403 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 TSSK4Q6SA08 328 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 TMC8Q8IU68 726 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 MFSD6LQ8IWD5 586 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 ZSCAN18Q8TBC5 510 aaPredicted RBP15.49■□□□□ 0.07
RPP40-201ENST00000319533 E2F7Q96AV8 911 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 TMX3Q96JJ7 454 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 TSPAN18Q96SJ8 248 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 NCDNQ9UBB6 729 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 YIPF1Q9Y548 306 aa15.49■□□□□ 0.07
RPP40-201ENST00000319533 MYH11P35749 1972 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 OR6C75A6NL08 312 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 H0YCG3 227 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 FAM189A1O60320 539 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 PIGRP01833 764 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 PLA2G4BP0C869 781 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 CPB1P15086 417 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 SDHBP21912 280 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 SCP2P22307 547 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 GDI1P31150 447 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 VIPR2P41587 438 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 GPR17Q13304 367 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 KYAT1Q16773 422 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 RSPO4Q2I0M5 234 aaPredicted RBP15.48■□□□□ 0.07
RPP40-201ENST00000319533 TMEM119Q4V9L6 283 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 ARSHQ5FYA8 562 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 SHKBP1Q8TBC3 707 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 FAM3CQ92520 227 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 SECISBP2LQ93073 1101 aaKnown RBP15.48■□□□□ 0.07
RPP40-201ENST00000319533 MSANTD3Q96H12 275 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 CRISPLD1Q9H336 500 aa15.48■□□□□ 0.07
RPP40-201ENST00000319533 UBQLN1Q9UMX0 589 aaKnown RBP15.48■□□□□ 0.07
RPP40-201ENST00000319533 TICRRQ7Z2Z1 1910 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 ZNF263O14978 683 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 SLC26A4O43511 780 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 CHRNB1P11230 501 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 MYL4P12829 197 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 GJA1P17302 382 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 TYMPP19971 482 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 PAX3P23760 479 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 NRLP54845 237 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 FCHO2Q0JRZ9 810 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 PLD1Q13393 1074 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 MYBPC2Q14324 1141 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 TEAD2Q15562 447 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 ARL6IP4Q66PJ3 421 aaKnown RBP15.47■□□□□ 0.07
RPP40-201ENST00000319533 TMEM130Q8N3G9 435 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 KIF12Q96FN5 646 aa15.47■□□□□ 0.07
RPP40-201ENST00000319533 DNAJC25Q9H1X3 360 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms