RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CCL14Q16627 93 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ZACNQ401N2 412 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ZNF484Q5JVG2 852 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 FBXO46Q6PJ61 603 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 FAM71AQ8IYT1 594 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 PPM1KQ8N3J5 372 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 RNF10Q8N5U6 811 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 KLHL23Q8NBE8 558 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 SPDYE1Q8NFV5 336 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 OR5B17Q8NGF7 314 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 DHX38Q92620 1227 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 LENG1Q96BZ8 264 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 NLRP4Q96MN2 994 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 MRPL4Q9BYD3 311 aaKnown RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 OSBPL7Q9BZF2 842 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 KDM4CQ9H3R0 1056 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 IFT122Q9HBG6 1241 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
CPNE1-201ENST00000317677 RBAKQ9NYW8 714 aaPredicted RBP13.94□□□□□ -0.18
CPNE1-201ENST00000317677 ATP8B3O60423 1300 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 GRID2IPA4D2P6 1211 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 SGPL1O95470 568 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 ATP6V1G2O95670 118 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 CTGFP29279 349 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 PTENP60484 403 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 E2F5Q15329 346 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 TBC1D25Q3MII6 688 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 MARCH8Q5T0T0 291 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 EEF1DP3Q658K8 133 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 MFN1Q8IWA4 741 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 EXOC8Q8IYI6 725 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 METTL13Q8N6R0 699 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 OR6J1Q8NGC5 347 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 NOX5Q96PH1 765 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 TLR10Q9BXR5 811 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 IRAK4Q9NWZ3 460 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 NOCTQ9UK39 431 aaKnown RBP13.93□□□□□ -0.18
CPNE1-201ENST00000317677 SNX12Q9UMY4 172 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 C15orf41Q9Y2V0 281 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 PCDHGC5Q9Y5F6 944 aa13.93□□□□□ -0.18
CPNE1-201ENST00000317677 C5orf60A6NFR6 353 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 H3BRB1 525 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 TOM1L1O75674 476 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 PALMO75781 387 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 ZMYND10O75800 440 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 IGHA2P01877 340 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 HLA-DRAP01903 254 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 ZNF865P0CJ78 1059 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 PRLRP16471 622 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 SCTRP47872 440 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 C10orf76Q5T2E6 689 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 IQSEC1Q6DN90 963 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 NOP9Q86U38 636 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CDR2LQ86X02 465 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 APLFQ8IW19 511 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 ZBTB8OSQ8IWT0 167 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 MREGQ8N565 214 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 EPS8L1Q8TE68 723 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 PPP1R13LQ8WUF5 828 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 NSMCE1Q8WV22 266 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CYFIP2Q96F07 1278 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 NT5C1BQ96P26 610 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 PCDHB18PQ96TA0 734 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CGRRF1Q99675 332 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 AGPAT1Q99943 283 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 APOBEC3GQ9HC16 384 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 NOD2Q9HC29 1040 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 HAUS2Q9NVX0 235 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 GNEQ9Y223 722 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 TRIM17Q9Y577 477 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 RPS6KL1Q9Y6S9 549 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 HMGB1P1B2RPK0 211 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 ACKR2O00590 384 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CLDN3O15551 220 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CYP26A1O43174 497 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CSDE1O75534 798 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 SKAP2O75563 359 aaPredicted RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 LDHAP00338 332 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CALCAP01258 141 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
CPNE1-201ENST00000317677 HOXC6P09630 235 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 TNNI1P19237 187 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 GALCP54803 685 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 MCL1Q07820 350 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 MAPK6Q16659 721 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 AMHR2Q16671 573 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 OLFML2BQ68BL8 750 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 SPOPLQ6IQ16 392 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 NFRKBQ6P4R8 1299 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 MTHFD1LQ6UB35 978 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 BRSK2Q8IWQ3 736 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 ARFGAP2Q8N6H7 521 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CD99L2Q8TCZ2 262 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 CAPZA3Q96KX2 299 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 PPP1R16BQ96T49 567 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 C2orf40Q9H1Z8 148 aa13.92□□□□□ -0.18
CPNE1-201ENST00000317677 LUC7LQ9NQ29 371 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms