RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 CRYGNQ8WXF5 182 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 NKD2Q969F2 451 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 RUSC1Q9BVN2 902 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 ARHGEF10LQ9HCE6 1279 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 CYLDQ9NQC7 956 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SAP30BPQ9UHR5 308 aaKnown RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 AJAP1Q9UKB5 411 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 SYNPO2Q9UMS6 1093 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 EFR3BQ9Y2G0 817 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 PCDHB2Q9Y5E7 798 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 COL22A1Q8NFW1 1626 aaPredicted RBP5.05□□□□□ -1.6
PTPN13-201ENST00000316707 LAMA4Q16363 1823 aa5.05□□□□□ -1.6
PTPN13-201ENST00000316707 MYO5AQ9Y4I1 1855 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 A0A0G2JND7 137 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 STRNO43815 780 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 ATP2B4P23634 1241 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 NMT1P30419 496 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RPL5P46777 297 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CYP4A11Q02928 519 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 R3HDM1Q15032 1099 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 ACSBG2Q5FVE4 666 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RCOR2Q8IZ40 523 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CYP4X1Q8N118 509 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 DGCR14Q96DF8 476 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CATSPER2Q96P56 530 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 EIF2AK1Q9BQI3 630 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SLCO1B3Q9NPD5 702 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 HEY2Q9UBP5 337 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RREB1Q92766 1687 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SPDYE5A6NIY4 337 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SIGLEC16A6NMB1 481 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CYP11B1P15538 503 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CDC25CP30307 473 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RAB15P59190 212 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SLFN13Q68D06 897 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC6Q86X45 466 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 LRRC47Q8N1G4 583 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 AZIN2Q96A70 460 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 C7orf26Q96N11 449 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PCDH9Q9HC56 1237 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 FRMPD2Q68DX3 1309 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 B2RBV5 119 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 USP17L10C9JJH3 530 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 H0YCG3 227 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 MSH4O15457 936 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PEX1O43933 1283 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TOM1O60784 492 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 KRT36O76013 467 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CPA3P15088 417 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 AKR1B1P15121 316 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PSMC6P62333 389 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 EVX2Q03828 476 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 LVRNQ6Q4G3 990 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 FBXO11Q86XK2 927 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 DNAAF5Q86Y56 855 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 ALDH16A1Q8IZ83 802 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RIT2Q99578 217 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 ZMYND8Q9ULU4 1186 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 FCHO1O14526 889 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 FAM155BO75949 473 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TM7SF2O76062 418 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PLS3P13797 630 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 FMO1Q01740 532 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 GRAPQ13588 217 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 THOC5Q13769 683 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CYLC2Q14093 348 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PKN2Q16513 984 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 C4orf33Q8N1A6 199 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 GRAPLQ8TC17 118 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 MKL1Q969V6 931 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 DDX27Q96GQ7 796 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PCDHB18PQ96TA0 734 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 STN1Q9H668 368 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 C17orf75Q9HAS0 396 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PTTG2Q9NZH5 202 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TAGLN3Q9UI15 199 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 GAS7O60861 476 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 ADRA1DP25100 572 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RANBP1P43487 201 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 VPS41P49754 854 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RHBDL3P58872 404 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 P3H1Q32P28 736 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 DHX37Q8IY37 1157 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 OXNAD1Q96HP4 312 aaPredicted RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TCRBV7S2A1N4TA0A589 114 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 MEIS1O00470 390 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TP73O15350 636 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 RRM1P23921 792 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 GCLMP48507 274 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 NFX1Q12986 1120 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PABPC1LQ4VXU2 614 aaKnown RBP5.04□□□□□ -1.6
PTPN13-201ENST00000316707 MFSD14BQ5SR56 506 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 PCNX4Q63HM2 1172 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 DPY19L2Q6NUT2 758 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 IZUMO2Q6UXV1 221 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 TPH2Q8IWU9 490 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SCUBE1Q8IWY4 988 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 CATSPER1Q8NEC5 780 aa5.04□□□□□ -1.6
PTPN13-201ENST00000316707 SLC5A5Q92911 643 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms