RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 WDR49Q8IV35 697 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM153AQ9UHL3 310 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 NOC2LQ9Y3T9 749 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 MROH7Q68CQ1 1323 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 ZRANB2O95218 330 aaKnown RBP eCLIP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 CD19P15391 556 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 RGS2P41220 211 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 NFX1Q12986 1120 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 LONRF2Q1L5Z9 754 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 DENND1BQ6P3S1 775 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 PRUNE1Q86TP1 453 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 ZNF564Q8TBZ8 553 aaPredicted RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 WHAMMQ8TF30 809 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 KIF12Q96FN5 646 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 MAF1Q9H063 256 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 TRMT13Q9NUP7 481 aaKnown RBP7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 AMACRQ9UHK6 382 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 USTQ9Y2C2 406 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 GRIN2DO15399 1336 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 BPTFQ12830 3046 aa7.48□□□□□ -1.21
LYSMD3-201ENST00000315948 UNCXA6NJT0 531 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 F8W810 466 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 RAD51CO43502 376 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CA12O43570 354 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PYGMP11217 842 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PRKAR2AP13861 404 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ADAM17P78536 824 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 SNX17Q15036 470 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 BEND6Q5SZJ8 279 aaPredicted RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 UBAP2Q5T6F2 1119 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 SLFN11Q7Z7L1 901 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 UBA3Q8TBC4 463 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CD99L2Q8TCZ2 262 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ANAPC7Q9UJX3 599 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 SPTLC1O15269 473 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PMM2O15305 246 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 RTN2O75298 545 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 RECQL4O94761 1208 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 LDHAP00338 332 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CYP3A5P20815 502 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PLA2G4AP47712 749 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CARSP49589 748 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MCCD1P59942 119 aaPredicted RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 GPC5P78333 572 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 OGDHQ02218 1023 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ADCY2Q08462 1091 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 EMC1Q8N766 993 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 IFT81Q8WYA0 676 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PAAF1Q9BRP4 392 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ELOVL4Q9GZR5 314 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 C2orf40Q9H1Z8 148 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 KIAA1586Q9HCI6 787 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM49BQ9NUQ9 324 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PRMT7Q9NVM4 692 aaPredicted RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 GRAP2O75791 330 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 IGHA2P01877 340 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CYBAP13498 195 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 SCP2P22307 547 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 KCNJ1P48048 391 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 B4GALNT4Q76KP1 1039 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MCOLN2Q8IZK6 566 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 C7orf31Q8N865 590 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 HES6Q96HZ4 224 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 CAPNS2Q96L46 248 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 TRIM51Q9BSJ1 452 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 HEMGNQ9BXL5 484 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 FUT8Q9BYC5 575 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 AGO3Q9H9G7 860 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PCDHB2Q9Y5E7 798 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 NCANO14594 1321 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ANK1P16157 1881 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 TRPM7Q96QT4 1865 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 DCAF8L1A6NGE4 600 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 PI4K2BG5E9Z4 385 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 GOLGA8SH3BPF8 625 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 H3BQF6 201 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MAGEB2O15479 319 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ZEB2O60315 1214 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 EIF4BP23588 611 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 TAS2R40P59535 323 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 NOMO3P69849 1222 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 GUCY2DQ02846 1103 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 TAF5Q15542 800 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 SH3PXD2AQ5TCZ1 1133 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ACAD10Q6JQN1 1059 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 TMCO3Q6UWJ1 677 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 UBR7Q8N806 425 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 RNF169Q8NCN4 708 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MSANTD4Q8NCY6 345 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 ATG4AQ8WYN0 398 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MRPL45Q9BRJ2 306 aaKnown RBP7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 NIF3L1Q9GZT8 377 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 AP5M1Q9H0R1 490 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 LRRC4CQ9HCJ2 640 aa7.47□□□□□ -1.21
LYSMD3-201ENST00000315948 MBLAC1A4D2B0 266 aaPredicted RBP7.46□□□□□ -1.21
LYSMD3-201ENST00000315948 DARSP14868 501 aaKnown RBP7.46□□□□□ -1.21
LYSMD3-201ENST00000315948 TCP1P17987 556 aaKnown RBP7.46□□□□□ -1.21
LYSMD3-201ENST00000315948 FAM193AP78312 1265 aa7.46□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms