RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 DSTYKQ6XUX3 929 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.01□□□□□ -0.33
SCFD1-201ENST00000311943 HS2ST1Q7LGA3 356 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 OR10T2Q8NGX3 314 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 TIGD1Q96MW7 591 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 EMILIN2Q9BXX0 1053 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 POMKQ9H5K3 350 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 INTS13Q9NVM9 706 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 C2CD2Q9Y426 696 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 TBC1D4O60343 1298 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 LDHAP00338 332 aaKnown RBP13.01□□□□□ -0.33
SCFD1-201ENST00000311943 MYL1P05976 194 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 TNNI1P19237 187 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 CYP3A5P20815 502 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 NR2F2P24468 414 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 ABCD1P33897 745 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 AARSP49588 968 aaKnown RBP eCLIP13.01□□□□□ -0.33
SCFD1-201ENST00000311943 ROR1Q01973 937 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 MRPL58Q14197 206 aaKnown RBP13.01□□□□□ -0.33
SCFD1-201ENST00000311943 ZNF658Q5TYW1 1059 aaPredicted RBP13.01□□□□□ -0.33
SCFD1-201ENST00000311943 POTEHQ6S545 545 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 TMEM184AQ6ZMB5 413 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 RNF19BQ6ZMZ0 732 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
SCFD1-201ENST00000311943 UBE4BO95155 1302 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 CCDC195A0A1B0GUA6 201 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 PPP1R3GB7ZBB8 358 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 M0QZQ0 153 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 PDXKO00764 312 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 ACAT1P24752 427 aaKnown RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 KYAT1Q16773 422 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 LRRTM3Q86VH5 581 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 OSTM1Q86WC4 334 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 GUF1Q8N442 669 aaKnown RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 PPP2R3CQ969Q6 453 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 RPGRIP1Q96KN7 1286 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 MFSD14AQ96MC6 490 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TRAF3IP3Q9Y228 551 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TSC2P49815 1807 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 KPNA7A9QM74 516 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 CYB561D2O14569 222 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 IL18RAPO95256 599 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 VNN1O95497 513 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 GLUD1P00367 558 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 ADH1AP07327 375 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TMEM191BP0C7N4 346 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 MYL6P60660 151 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 PPP3CAQ08209 521 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 PSMD6Q15008 389 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 CLEC17AQ6ZS10 378 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 CD302Q8IX05 232 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 C12orf56Q8IXR9 622 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 ADSSL1Q8N142 457 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 KREMEN2Q8NCW0 462 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 PARD3BQ8TEW8 1205 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 ZNF707Q96C28 371 aaPredicted RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 GSDMAQ96QA5 445 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 UHRF1Q96T88 793 aaPredicted RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 CDCA3Q99618 268 aaPredicted RBP13□□□□□ -0.33
SCFD1-201ENST00000311943 PI4K2AQ9BTU6 479 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 SMOC2Q9H3U7 446 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 TMLHEQ9NVH6 421 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 L1RE1Q9UN81 338 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 POLIQ9UNA4 740 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 SLC27A5Q9Y2P5 690 aa13□□□□□ -0.33
SCFD1-201ENST00000311943 DLL1O00548 723 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 CCL16O15467 120 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
SCFD1-201ENST00000311943 ATP2C2O75185 946 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 BFSP1Q12934 665 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 ADAM9Q13443 819 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 MORC3Q14149 939 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 SMAD2Q15796 467 aaKnown RBP12.99□□□□□ -0.33
SCFD1-201ENST00000311943 SLC7A14Q8TBB6 771 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 SUSD6Q92537 303 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 RHOBTB2Q9BYZ6 727 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 ADAM7Q9H2U9 754 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 DERAQ9Y315 318 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 SNX9Q9Y5X1 595 aa12.99□□□□□ -0.33
SCFD1-201ENST00000311943 SPDYE4A6NLX3 237 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 LMO2P25791 158 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 TAF6P49848 677 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 CDH8P55286 799 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 YWHAHQ04917 246 aaPredicted RBP12.98□□□□□ -0.33
SCFD1-201ENST00000311943 SOWAHAQ2M3V2 549 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 ATAD1Q8NBU5 361 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 CASP10Q92851 521 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 CGRRF1Q99675 332 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 DUSP9Q99956 384 aaKnown RBP12.98□□□□□ -0.33
SCFD1-201ENST00000311943 FNIP2Q9P278 1114 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 CTNND2Q9UQB3 1225 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 BDP1A6H8Y1 2624 aa12.98□□□□□ -0.33
SCFD1-201ENST00000311943 CUL9Q8IWT3 2517 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms