RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GRID1Q9ULK0 1009 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 TRIM49P0CI25 452 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 TRIM49CP0CI26 452 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 CYP4Z1Q86W10 505 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 SNX31Q8N9S9 440 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 CYFIP2Q96F07 1278 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 FBXL5Q9UKA1 691 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 USP1O94782 785 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 COPAP53621 1224 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 PSMC5P62195 406 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 LRRC24Q50LG9 513 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 CNGB3Q9NQW8 809 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 NEK10Q6ZWH5 1172 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 NLRP9Q7RTR0 991 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 LONP2Q86WA8 852 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 PIK3R5Q8WYR1 880 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 SLC10A4Q96EP9 437 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 FAM213AQ9BRX8 229 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 STK33Q9BYT3 514 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 ARMC7Q9H6L4 198 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 STON1Q9Y6Q2 735 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 TAB1Q15750 504 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 CCDC60Q8IWA6 550 aaPredicted RBP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 ECSITQ9BQ95 431 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 PZPP20742 1482 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 IFNA14P01570 189 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 CCT8P50990 548 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 SHROOM1Q2M3G4 852 aaPredicted RBP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 USP39Q53GS9 565 aaKnown RBP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 PRPF39Q86UA1 669 aaKnown RBP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 PAK5Q9P286 719 aa16.18■□□□□ 0.18
HCFC1-201ENST00000310441 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.18■□□□□ 0.18
HCFC1-201ENST00000310441 IQCA1LA6NCM1 817 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 SUPT3HB4E1H0 165 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 IL18RAPO95256 599 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 BMP10O95393 424 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 SYCP2LQ5T4T6 812 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 OLFML2BQ68BL8 750 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 EIF2AK2P19525 551 aaKnown RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 HOXA13P31271 388 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 PEX5P50542 639 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 TTLL9Q3SXZ7 439 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 TBC1D10BQ4KMP7 808 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 SPATA4Q8NEY3 305 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 PIGOQ8TEQ8 1089 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 POLR3FQ9H1D9 316 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 PER1O15534 1290 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 TBC1D12O60347 775 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 ENO3P13929 434 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 DNAJC7Q99615 494 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 RGS5O15539 181 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 SLC16A2P36021 539 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 CCT8L2Q96SF2 557 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 RBM15Q96T37 977 aaKnown RBP eCLIP16.17■□□□□ 0.182e-7■■■■□ 25.3
HCFC1-201ENST00000310441 GDF11O95390 407 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 MOSPD2Q8NHP6 518 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 WNK4Q96J92 1243 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 FAM47E-STBD1D6RA91 191 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 PIGUQ9H490 435 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 MLXIPLQ9NP71 852 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 DMAP1Q9NPF5 467 aaPredicted RBP16.17■□□□□ 0.18
HCFC1-201ENST00000310441 MFSD14CQ5VZR4 134 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 LRRC49Q8IUZ0 686 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 INPP5DQ92835 1189 aa16.17■□□□□ 0.18
HCFC1-201ENST00000310441 STX7O15400 261 aaKnown RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 THTPAQ9BU02 230 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 RMND5AQ9H871 391 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 GRIK1P39086 918 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 PRCPP42785 496 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 PLOD1Q02809 727 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 PCDHA6Q9UN73 950 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 HPS5Q9UPZ3 1129 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 PCDHA8Q9Y5H6 950 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 DALRD3Q5D0E6 543 aaKnown RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 TMEM154Q6P9G4 183 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 RNF25Q96BH1 459 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 MYO18AQ92614 2054 aaKnown RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 OSCP1Q8WVF1 389 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 ABCA8O94911 1581 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 SRGAP2O75044 1071 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 ZNF677Q86XU0 584 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 SPATA2LQ8IUW3 424 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 ANKRD49Q8WVL7 239 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 TASP1Q9H6P5 420 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 FAM196AQ6ZSG2 479 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 RSAD1Q9HA92 442 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 JPH1Q9HDC5 661 aaPredicted RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 AGO2Q9UKV8 859 aaKnown RBP16.16■□□□□ 0.18
HCFC1-201ENST00000310441 ARMC6Q6NXE6 501 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 OOSP2Q86WS3 158 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 HIC2Q96JB3 615 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 LXNQ9BS40 222 aa16.16■□□□□ 0.18
HCFC1-201ENST00000310441 P4HBP07237 508 aaKnown RBP16.15■□□□□ 0.18
HCFC1-201ENST00000310441 FGFR4P22455 802 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 PRIM2P49643 509 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 RCSD1Q6JBY9 416 aa16.15■□□□□ 0.18
HCFC1-201ENST00000310441 EXOSC4Q9NPD3 245 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms