RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 RPS6KA4O75676 772 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 LRRC34Q8IZ02 419 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 E2F7Q96AV8 911 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 KIF9Q9HAQ2 790 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 PTPRUQ92729 1446 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 S100A5P33763 92 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 RNF135Q8IUD6 432 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 TEKT4Q8WW24 435 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MCEEQ96PE7 176 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CCT7Q99832 543 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 PNMA3Q9UL41 463 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 PLEKP08567 350 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 GHRP10912 638 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 TMED10P49755 219 aaKnown RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 SLC20A2Q08357 652 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 NSUN2Q08J23 767 aaKnown RBP eCLIP13.8□□□□□ -0.2
SNED1-201ENST00000310397 PID1Q7Z2X4 250 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MAML3Q96JK9 1138 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 EPAS1Q99814 870 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 ADNPQ9H2P0 1102 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MARCOQ9UEW3 520 aaPredicted RBP13.8□□□□□ -0.2
SNED1-201ENST00000310397 GNAT1P11488 350 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CALB2P22676 271 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 MDH1BQ5I0G3 518 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 USP6NLQ92738 828 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 KBTBD4Q9NVX7 518 aa13.8□□□□□ -0.2
SNED1-201ENST00000310397 CAND2O75155 1236 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 NCOA4Q13772 614 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 NT5DC1Q5TFE4 455 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 TTI2Q6NXR4 508 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 LRRC6Q86X45 466 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 IL25Q9H293 177 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 COG4Q9H9E3 785 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 AP4S1Q9Y587 144 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 H2AFYO75367 372 aaKnown RBP13.79□□□□□ -0.2
SNED1-201ENST00000310397 POLBP06746 335 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 SGSM1Q2NKQ1 1148 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 AGR3Q8TD06 166 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 CAPN6Q9Y6Q1 641 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 HNRNPCL2B2RXH8 293 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 PDHBP11177 359 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 EEPD1Q7L9B9 569 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 RTKN2Q8IZC4 609 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
SNED1-201ENST00000310397 GID8Q9NWU2 228 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 PHTF1Q9UMS5 762 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 TNS3Q68CZ2 1445 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 SPATA31A3Q5VYP0 1347 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 OVOS2A0A0J9YW53 1432 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 CSF1RP07333 972 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 OVOS2Q6IE36 1432 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 TRIM65Q6PJ69 517 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 MASTLQ96GX5 879 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 TRIM54Q9BYV2 358 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 PCMTD2Q9NV79 361 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 GFAPP14136 432 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 DDX5P17844 614 aaKnown RBP13.79□□□□□ -0.2
SNED1-201ENST00000310397 ADRA2BP18089 450 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 KCNJ1P48048 391 aa13.79□□□□□ -0.2
SNED1-201ENST00000310397 PPHLN1Q8NEY8 458 aaKnown RBP13.79□□□□□ -0.2
SNED1-201ENST00000310397 NBPF26B4DH59 902 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 MYBP10242 640 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 MXD4Q14582 209 aaPredicted RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 C16orf86Q6ZW13 317 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 KRT27Q7Z3Y8 459 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 CATSPER3Q86XQ3 398 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 NBPF15Q8N660 670 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 TERB1Q8NA31 727 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 PAWRQ96IZ0 340 aaKnown RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 TNIP3Q96KP6 325 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 ZSWIM1Q9BR11 485 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 RAD17O75943 681 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 GRIN1Q05586 938 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 H3BQF6 201 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 MSL3Q8N5Y2 521 aaKnown RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 FAM217BQ9NTX9 383 aaPredicted RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 C3orf70A6NLC5 250 aaPredicted RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 KRT8P05787 483 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 ADCK1Q86TW2 530 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 TNIP2Q8NFZ5 429 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 ASAP3Q8TDY4 903 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 RUBCNLQ9H714 662 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 GTPBP10A4D1E9 387 aaKnown RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 AIM2O14862 343 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 PON1P27169 355 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 SESN2P58004 480 aaPredicted RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 KIAA1841Q6NSI8 718 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 CLEC4FQ8N1N0 589 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 TM9SF1O15321 606 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 SUPT3HO75486 399 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 PYGLP06737 847 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 STIP1P31948 543 aaKnown RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 TSPY1Q01534 308 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 KCNV1Q6PIU1 500 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
SNED1-201ENST00000310397 FEZF2Q8TBJ5 459 aa13.78□□□□□ -0.2
SNED1-201ENST00000310397 DDX20Q9UHI6 824 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms