RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PRDM12Q9H4Q4 367 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 MRPL17Q9NRX2 175 aaKnown RBP19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 SIX4Q9UIU6 781 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 PCDHB8Q9UN66 801 aa19.27■□□□□ 0.68
SSSCA1-201ENST00000309328 EPOPA6NHQ4 379 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 FSCN2O14926 492 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 C1RP00736 705 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 TYMPP19971 482 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 FGFR3P22607 806 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 MTIF2P46199 727 aaKnown RBP19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 GCLMP48507 274 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 GUCY2FP51841 1108 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 C1orf220Q5T0J3 134 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 FAM171A1Q5VUB5 890 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 LRSAM1Q6UWE0 723 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 ANKS3Q6ZW76 656 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 DPH6Q7L8W6 267 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 SPRED2Q7Z698 418 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 FBXL13Q8NEE6 735 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 BCL7CQ8WUZ0 217 aaPredicted RBP19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 GPR62Q9BZJ7 368 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 COQ4Q9Y3A0 265 aa19.26■□□□□ 0.67
SSSCA1-201ENST00000309328 KCNJ18B7U540 433 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 H7C4K7 107 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 NCK2O43639 380 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 AFPP02771 609 aaKnown RBP19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 PIK3CAP42336 1068 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 PPP3CAQ08209 521 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 KCNJ12Q14500 433 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 MAN2A1Q16706 1144 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 TCP11X2Q5H9J9 407 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 CDKAL1Q5VV42 579 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 CD300LGQ6UXG3 332 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 METTL23Q86XA0 190 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 IRF2BP1Q8IU81 584 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 TMEM86AQ8N2M4 240 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 TOP6BLQ8N6T0 577 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 FAM200AQ8TCP9 573 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 MICAL1Q8TDZ2 1067 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 HASPINQ8TF76 798 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 PIK3R5Q8WYR1 880 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 CDCA3Q99618 268 aaPredicted RBP19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 EMILIN2Q9BXX0 1053 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 FAM124BQ9H5Z6 455 aaPredicted RBP19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 CACNG4Q9UBN1 327 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 TRANK1O15050 2925 aa19.25■□□□□ 0.67
SSSCA1-201ENST00000309328 PDCD11Q14690 1871 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 GTPBP10A4D1E9 387 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 HUS1O60921 280 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 CYP11A1P05108 521 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 FMO5P49326 533 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 ZNF445P59923 1031 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 TNNC1P63316 161 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 MYL7Q01449 175 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 KCNH2Q12809 1159 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 ZNF699Q32M78 642 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 WDR44Q5JSH3 913 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 PPFIBP1Q86W92 1011 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 CREBRFQ8IUR6 639 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 AOPEPQ8N6M6 819 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 MRPL43Q8N983 215 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 RABGGTAQ92696 567 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 SENP8Q96LD8 212 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 VN1R3Q9BXE9 311 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 TSPY26PQ9H489 355 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 NSUN3Q9H649 340 aaKnown RBP19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 MTMR10Q9NXD2 777 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 FNIP2Q9P278 1114 aa19.24■□□□□ 0.67
SSSCA1-201ENST00000309328 NLRC5Q86WI3 1866 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 F8W810 466 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 CYB561D2O14569 222 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 CXCL14O95715 111 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 ASS1P00966 412 aaKnown RBP19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 HLA-DRAP01903 254 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 BRCC3P46736 316 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 YWHAHQ04917 246 aaPredicted RBP19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 CAMK1Q14012 370 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 PTPN14Q15678 1187 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 ZNF667Q5HYK9 610 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 KIAA0319Q5VV43 1072 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 SMYD5Q6GMV2 418 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 ZNF280DQ6N043 979 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 TTC39CQ8N584 583 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 FAM161BQ96MY7 647 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 CDX2Q99626 313 aaPredicted RBP19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 TUBGCP2Q9BSJ2 902 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 DNAI2Q9GZS0 605 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 XYLT2Q9H1B5 865 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 FANCLQ9NW38 375 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 RAB20Q9NX57 234 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 DPP7Q9UHL4 492 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 BACE2Q9Y5Z0 518 aa19.23■□□□□ 0.67
SSSCA1-201ENST00000309328 ANK1P16157 1881 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 GOLGA6L19H0YKK7 550 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 PPEF2O14830 753 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 OAZ2O95190 189 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 CST3P01034 146 aaPredicted RBP19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 ADH1AP07327 375 aa19.22■□□□□ 0.67
SSSCA1-201ENST00000309328 CDK11BP21127 795 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms