RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 RRN3Q9NYV6 651 aa16.06■□□□□ 0.16
LEMD3-201ENST00000308330 SPDYE5A6NIY4 337 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 POC1B-GALNT4F8VUJ3 575 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 AGTP01019 485 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 PTPROQ16827 1216 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 LRRC74BQ6ZQY2 392 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 STX12Q86Y82 276 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 MTBPQ96DY7 904 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 ACAP3Q96P50 834 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 TRNAU1APQ9NX07 287 aaKnown RBP16.05■□□□□ 0.16
LEMD3-201ENST00000308330 SRRM3A6NNA2 597 aaPredicted RBP16.05■□□□□ 0.16
LEMD3-201ENST00000308330 CCDC188H7C350 402 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 TARSP26639 723 aaKnown RBP16.05■□□□□ 0.16
LEMD3-201ENST00000308330 SWSAP1Q6NVH7 229 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 C16orf86Q6ZW13 317 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 EMILIN3Q9NT22 766 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 TXNP10599 105 aaKnown RBP16.05■□□□□ 0.16
LEMD3-201ENST00000308330 ABCB4P21439 1286 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 RAB14P61106 215 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 PDIA5Q14554 519 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 CDR2LQ86X02 465 aaPredicted RBP16.05■□□□□ 0.16
LEMD3-201ENST00000308330 KIFC3Q9BVG8 833 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 SPDYE2BA6NHP3 402 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 CFAP99D6REC4 459 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 PDLIM1O00151 329 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 BIRC5O15392 142 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 ITGA2BP08514 1039 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 SPDYE6P0CI01 402 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 THNSL1Q8IYQ7 743 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 C7orf31Q8N865 590 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 OR2W6PQ8NHA6 318 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 MAML1Q92585 1016 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 SPATA33Q96N06 139 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 TMEM206Q9H813 350 aa16.05■□□□□ 0.16
LEMD3-201ENST00000308330 O00370 1275 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 IDH3BO43837 385 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 FTCDO95954 541 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 ATF4P18848 351 aaPredicted RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 HOXD12P35452 270 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 PTDSS1P48651 473 aaKnown RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 ARFIP2P53365 341 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 SDE2Q6IQ49 451 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 FUCA2Q9BTY2 467 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 MARCH7Q9H992 704 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 NHEJ1Q9H9Q4 299 aaPredicted RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 KCNH4Q9UQ05 1017 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 DAB2P98082 770 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 RESTQ13127 1097 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 HIC1Q14526 733 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 NR1D2Q14995 579 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 EXOC3L4Q17RC7 722 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 PPP1R18Q6NYC8 613 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 GALNT4Q8N4A0 578 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 MDM1Q8TC05 714 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 TMEM106CQ9BVX2 250 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 GIN1Q9NXP7 522 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 GABBR1Q9UBS5 961 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 NXF1Q9UBU9 619 aaKnown RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 LINC00854A0A1B0GVQ3 168 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 ASAP2O43150 1006 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 MGRN1O60291 552 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 PIK3CAP42336 1068 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 ITGA9Q13797 1035 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 MCPH1Q8NEM0 835 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 TUBGCP3Q96CW5 907 aa16.04■□□□□ 0.16
LEMD3-201ENST00000308330 EPB41L4AQ9HCS5 686 aaPredicted RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 METTL5Q9NRN9 209 aaKnown RBP16.04■□□□□ 0.16
LEMD3-201ENST00000308330 CASP5P51878 434 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ZNF668Q96K58 619 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ZDHHC15Q96MV8 337 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 NT5C1BQ96P26 610 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 QKIQ96PU8 341 aaKnown RBP eCLIP16.03■□□□□ 0.163e-14■■■■■ 63.7
LEMD3-201ENST00000308330 GBA2Q9HCG7 927 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 CYLDQ9NQC7 956 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ABHD10Q9NUJ1 306 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 TDRKHQ9Y2W6 561 aaKnown RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 KLHL41O60662 606 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 GFPT2O94808 682 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 STIP1P31948 543 aaKnown RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 PRELPP51888 382 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 TRIM65Q6PJ69 517 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ADCK1Q86TW2 530 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 DGCR14Q96DF8 476 aaKnown RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 TXNDC16Q9P2K2 825 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 HAO1Q9UJM8 370 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 TTLL3Q9Y4R7 772 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 SESN1Q9Y6P5 492 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ASMTLO95671 621 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 TTC4O95801 387 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 CCNCP24863 283 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 CARSP49589 748 aaKnown RBP16.03■□□□□ 0.16
LEMD3-201ENST00000308330 ARPP19P56211 112 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 SCRN3Q0VDG4 424 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 LIN52Q52LA3 116 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 RASGRP2Q7LDG7 609 aa16.03■□□□□ 0.16
LEMD3-201ENST00000308330 CNBD2Q96M20 576 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms