RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 FNIP2Q9P278 1114 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DSEQ9UL01 958 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 C2orf16Q68DN1 1984 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LRRIQ3A6PVS8 624 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AKAP3O75969 853 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 GLUD1P00367 558 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CNPP09543 421 aaKnown RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CD44P16070 742 aaKnown RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BMP6P22004 513 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KCNA5P22460 613 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 AARSP49588 968 aaKnown RBP eCLIP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PMS1P54277 932 aaKnown RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LILRA4P59901 499 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 YWHAHQ04917 246 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CCDC40Q4G0X9 1142 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 VARS2Q5ST30 1063 aaKnown RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TCERG1LQ5VWI1 586 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CD300LGQ6UXG3 332 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TRAPPC11Q7Z392 1133 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 METTL23Q86XA0 190 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SENP8Q96LD8 212 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CEP63Q96MT8 703 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 POP1Q99575 1024 aaKnown RBP11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RXFP1Q9HBX9 757 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MTRRQ9UBK8 725 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 HCFC2Q9Y5Z7 792 aa11.85□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PPP1R3GB7ZBB8 358 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 M0QZQ0 153 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CYB561D2O14569 222 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TEX28O15482 410 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LINC01565O15544 149 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 STX10O60499 249 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LILRB3O75022 631 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RPL17P18621 184 aaKnown RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TYMPP19971 482 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PIK3CAP42336 1068 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CLCN4P51793 760 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 STX17P56962 302 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 NLRP12P59046 1061 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ENPEPQ07075 957 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 ADAM15Q13444 863 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 DCAF17Q5H9S7 520 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 OVOS1Q6IE37 1185 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FOXR2Q6PJQ5 311 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 EEF2KMTQ96G04 330 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 FAM84AQ96KN4 292 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 OXCT2Q9BYC2 517 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 IMPG2Q9BZV3 1241 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MMRN2Q9H8L6 949 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 PRDM6Q9NQX0 595 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 RWDD2AQ9UIY3 292 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BARX2Q9UMQ3 279 aaPredicted RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BACE2Q9Y5Z0 518 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 CDY1Q9Y6F8 540 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 MYH10P35580 1976 aa11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 TCF20Q9UGU0 1960 aaKnown RBP11.84□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 BRWD1Q9NSI6 2320 aa11.83□□□□□ -0.51
CSPG4P1Y-201ENST00000306641 IKBKBO14920 756 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 HUS1O60921 280 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TBX10O75333 385 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GLP2RO95838 553 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TRIM49P0CI25 452 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TRIM49CP0CI26 452 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CPB1P15086 417 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 IGFBP6P24592 240 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ATICP31939 592 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TNNC1P63316 161 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 COL19A1Q14993 1142 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CTC1Q2NKJ3 1217 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TTI2Q6NXR4 508 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PALB2Q86YC2 1186 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ZC3H3Q8IXZ2 948 aaKnown RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 THEM5Q8N1Q8 247 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CCDC150Q8NCX0 1101 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PLEKHO2Q8TD55 490 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ATXN2LQ8WWM7 1075 aaKnown RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 METTL14Q9HCE5 456 aaKnown RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 MAN1C1Q9NR34 630 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SIX4Q9UIU6 781 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 CD207Q9UJ71 328 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 FAM50BQ9Y247 325 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TIMM13Q9Y5L4 95 aaPredicted RBP11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SNX9Q9Y5X1 595 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 TRANK1O15050 2925 aa11.83□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 H3BQ06 376 aaPredicted RBP11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 SPTLC1O15269 473 aa11.82□□□□□ -0.52
CSPG4P1Y-201ENST00000306641 GNA14O95837 355 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms