RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 OLFML2BQ68BL8 750 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 TRIM42Q8IWZ5 723 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 SYT2Q8N9I0 419 aaPredicted RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 RDH13Q8NBN7 331 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 MBOAT7Q96N66 472 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 TMEM237Q96Q45 408 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 NDNQ99608 321 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 PACSIN1Q9BY11 444 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 RXFP1Q9HBX9 757 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 GALNT8Q9NY28 637 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ECEL1O95672 775 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 FAM200BP0CF97 657 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 UBA1P22314 1058 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 VHLP40337 213 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ERFP50548 548 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 CYP2J2P51589 502 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ADAM9Q13443 819 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 FYB2Q5VWT5 728 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 ALKBH5Q6P6C2 394 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 FAM167AQ96KS9 214 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 NEUROG2Q9H2A3 272 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 PABPC3Q9H361 631 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 KMT5AQ9NQR1 393 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 DNAJC17Q9NVM6 304 aaKnown RBP11.56□□□□□ -0.56
LSM3-201ENST00000306024 VAV3Q9UKW4 847 aa11.56□□□□□ -0.56
LSM3-201ENST00000306024 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 EXOC3O60645 756 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 ATP6V1G1O75348 118 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 RHOBTB3O94955 611 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 RNASELQ05823 741 aaKnown RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 SLC18A3Q16572 532 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 TBC1D25Q3MII6 688 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 TMEM119Q4V9L6 283 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 IRGCQ6NXR0 463 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 MTHFD1LQ6UB35 978 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 METTL7BQ6UX53 244 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 MCPH1Q8NEM0 835 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SYT15Q9BQS2 421 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 RUSC1Q9BVN2 902 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 METTL5Q9NRN9 209 aaKnown RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 LMCD1Q9NZU5 365 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 EXOC7Q9UPT5 735 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 CHMP2BQ9UQN3 213 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 FRMD4BQ9Y2L6 1034 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SLC45A1Q9Y2W3 748 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 DICER1Q9UPY3 1922 aaKnown RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 TMEM150BA6NC51 233 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 EPHB6O15197 1021 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 AOC2O75106 756 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SUPT20HL2P0C7V6 817 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 PTDSS1P48651 473 aaKnown RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 COG7P83436 770 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 CRHR2Q13324 411 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 ECM1Q16610 540 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 RINT1Q6NUQ1 792 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 ST13P4Q8IZP2 240 aaPredicted RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 RAET1EQ8TD07 263 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 COPS5Q92905 334 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SMC6Q96SB8 1091 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 WDR35Q9P2L0 1181 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 MTUS1Q9ULD2 1270 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 LRCH1Q9Y2L9 728 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 TLL2Q9Y6L7 1015 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 A0A087X0T9 212 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 MAGEA13PA6NCF6 341 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SLC15A5A6NIM6 579 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 TLR2O60603 784 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 SLC10A3P09131 477 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 FAM228BP0C875 321 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 CDR2Q01850 454 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 ZNF211Q13398 564 aaPredicted RBP11.55□□□□□ -0.56
LSM3-201ENST00000306024 LONRF1Q17RB8 773 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 PHLDB2Q86SQ0 1253 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 TINF2Q9BSI4 451 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 ABHD16BQ9H3Z7 469 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 CEP72Q9P209 647 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 NOD1Q9Y239 953 aa11.55□□□□□ -0.56
LSM3-201ENST00000306024 A6NHS1 94 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 RSPH10B2B2RC85 870 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 SPATA31C2B4DYI2 1134 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 CLIC2O15247 247 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 RSPH10BP0C881 870 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 ADCYAP1R1P41586 468 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 TNFAIP2Q03169 654 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 LAMC2Q13753 1193 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 RCN1Q15293 331 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 GJC2Q5T442 439 aaPredicted RBP11.54□□□□□ -0.56
LSM3-201ENST00000306024 SEL1L2Q5TEA6 688 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 CCDC62Q6P9F0 684 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 LCA5Q86VQ0 697 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 SRRM1Q8IYB3 904 aaKnown RBP11.54□□□□□ -0.56
LSM3-201ENST00000306024 RBBP8NLQ8NC74 664 aaPredicted RBP11.54□□□□□ -0.56
LSM3-201ENST00000306024 CFAP61Q8NHU2 1237 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 CYTH2Q99418 400 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 RMI1Q9H9A7 625 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 ARMCX3Q9UH62 379 aaPredicted RBP11.54□□□□□ -0.56
LSM3-201ENST00000306024 MYH10P35580 1976 aa11.54□□□□□ -0.56
LSM3-201ENST00000306024 CIB2O75838 187 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms