RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 FAXCQ5TGI0 409 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 LINC00116Q8NCU8 138 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 LRRC4BQ9NT99 713 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 NINJ2Q9NZG7 142 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 USP20Q9Y2K6 914 aa12.8□□□□□ -0.36
PDGFD-201ENST00000302251 A0A0A6YYK5 440 aaPredicted RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 O00370 1275 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 DKC1O60832 514 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 RAD17O75943 681 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 SRGAP2CP0DJJ0 459 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 SSTR1P30872 391 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 HIC1Q14526 733 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 EEPD1Q7L9B9 569 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 PRPF39Q86UA1 669 aaKnown RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 GALNT4Q8N4A0 578 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 C7orf31Q8N865 590 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 NLRP7Q8WX94 980 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 GTF3C4Q9UKN8 822 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 MYH8P13535 1937 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 NDC80O14777 642 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 APRTP07741 180 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 SETSIPP0DME0 302 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 CYP11B1P15538 503 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 BRD2P25440 801 aaKnown RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 QARSP47897 775 aaKnown RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 YARSP54577 528 aaKnown RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 MTMR1Q13613 665 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 KPNB1Q14974 876 aaKnown RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 CRELD2Q6UXH1 353 aaPredicted RBP12.79□□□□□ -0.36
PDGFD-201ENST00000302251 IZUMO2Q6UXV1 221 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 MCEEQ96PE7 176 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 MSTO1Q9BUK6 570 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 SENP1Q9P0U3 644 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 DCCP43146 1447 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 PPIP5K2O43314 1243 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 UNC5CO95185 931 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 DLG4P78352 724 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 PTK7Q13308 1070 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 ART3Q13508 389 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 ICA1LQ8NDH6 482 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 CKAP2Q8WWK9 683 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 CDKL2Q92772 493 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 HES6Q96HZ4 224 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 BCAS3Q9H6U6 928 aa12.79□□□□□ -0.36
PDGFD-201ENST00000302251 MGRN1O60291 552 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 ADRA1DP25100 572 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 RSPH3Q86UC2 560 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 DNAAF3Q8N9W5 541 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM35BQ8NCS4 154 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 MCUQ8NE86 351 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 RIOX1Q9H6W3 641 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 A1CFQ9NQ94 594 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 SCAF8Q9UPN6 1271 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 INO80B-WBP1J3KQ70 363 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 CST8O60676 142 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 P4HBP07237 508 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TCN1P20061 433 aaPredicted RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM119Q4V9L6 283 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 ZCWPW2Q504Y3 356 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 SEZ6Q53EL9 994 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 ATXN2LQ8WWM7 1075 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 CENPTQ96BT3 561 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 INO80BQ9C086 356 aaPredicted RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 PCMTD2Q9NV79 361 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM150BA6NC51 233 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 EML1O00423 815 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 SUPT3HO75486 399 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 GPC4O75487 556 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 BBOX1O75936 387 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 PTPN4P29074 926 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 RPA3P35244 121 aaPredicted RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 CRKP46108 304 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 NFIAQ12857 509 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 TMEM259Q4ZIN3 620 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 MAP7D3Q8IWC1 876 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 FAM149B1Q96BN6 582 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 RAB6BQ9NRW1 208 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 XPO7Q9UIA9 1087 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 KRT38O76015 456 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 STK10O94804 968 aaKnown RBP12.78□□□□□ -0.36
PDGFD-201ENST00000302251 MROH9Q5TGP6 573 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 RNF220Q5VTB9 566 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 ZNF720Q7Z2F6 126 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 LRRC6Q86X45 466 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 CCDC33Q8N5R6 958 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 ZNF384Q8TF68 577 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 SLC7A3Q8WY07 619 aa12.78□□□□□ -0.36
PDGFD-201ENST00000302251 IGSF9BQ9UPX0 1349 aa12.77□□□□□ -0.36
PDGFD-201ENST00000302251 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
PDGFD-201ENST00000302251 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.77□□□□□ -0.36
PDGFD-201ENST00000302251 FAM86B1E9PN63 330 aa12.77□□□□□ -0.36
PDGFD-201ENST00000302251 CES2O00748 559 aa12.77□□□□□ -0.36
PDGFD-201ENST00000302251 PPEF1O14829 653 aaPredicted RBP12.77□□□□□ -0.36
PDGFD-201ENST00000302251 RPS6KA4O75676 772 aa12.77□□□□□ -0.36
PDGFD-201ENST00000302251 KRT36O76013 467 aa12.77□□□□□ -0.36
PDGFD-201ENST00000302251 HSPA4LO95757 839 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms