RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 ZBTB10Q96DT7 871 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 ZBTB45Q96K62 511 aaPredicted RBP14.86□□□□□ -0.03
SDC2-201ENST00000302190 GTF3C4Q9UKN8 822 aa14.86□□□□□ -0.03
SDC2-201ENST00000302190 CDH16O75309 829 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 ITGB5P18084 799 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 PPP2R5CQ13362 524 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 C1orf228Q6PIY5 440 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 FUKQ8N0W3 1084 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 LRRC71Q8N4P6 559 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 EPS8L1Q8TE68 723 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 HEXIM2Q96MH2 286 aaKnown RBP14.85□□□□□ -0.03
SDC2-201ENST00000302190 HSD17B14Q9BPX1 270 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 TMEM121Q9BTD3 319 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 TRAIPQ9BWF2 469 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 MYOZ2Q9NPC6 264 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 UBN1Q9NPG3 1134 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 LRRC37AA6NMS7 1700 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 AP1G2O75843 785 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 LCA5LO95447 670 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 ADRB2P07550 413 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 VIL1P09327 827 aaKnown RBP14.85□□□□□ -0.03
SDC2-201ENST00000302190 RARGP13631 454 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 KRT76Q01546 638 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 CDR2Q01850 454 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 TNFAIP1Q13829 316 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 ZNF354CQ86Y25 554 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 LRRC57Q8N9N7 239 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 SLC9A2Q9UBY0 812 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 HAO1Q9UJM8 370 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 ATP9AO75110 1047 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 GH1P01241 217 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 POLR2BP30876 1174 aaKnown RBP14.85□□□□□ -0.03
SDC2-201ENST00000302190 PSMC1P62191 440 aaKnown RBP14.85□□□□□ -0.03
SDC2-201ENST00000302190 WDR72Q3MJ13 1102 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 C1orf131Q8NDD1 294 aaKnown RBP14.85□□□□□ -0.03
SDC2-201ENST00000302190 TRIM11Q96F44 468 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 HES6Q96HZ4 224 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 TMEM237Q96Q45 408 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 PCDHB18PQ96TA0 734 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 UVRAGQ9P2Y5 699 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 CHMP2BQ9UQN3 213 aa14.85□□□□□ -0.03
SDC2-201ENST00000302190 DNM1LO00429 736 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 MCF2LO15068 1137 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 MAPK13O15264 365 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 ETS1P14921 441 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 CHKAP35790 457 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 RAD23BP54727 409 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 PRKCEQ02156 737 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 ALCAMQ13740 583 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 PSMD6Q15008 389 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 MIS18BP1Q6P0N0 1132 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 TRPM4Q8TD43 1214 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 P2RX7Q99572 595 aaKnown RBP14.84□□□□□ -0.03
SDC2-201ENST00000302190 ARL2BPQ9Y2Y0 163 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 KLHL33A6NCF5 533 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 TOM1L1O75674 476 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 SNHG28P0DPA3 235 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 GTF2H1P32780 548 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 LMNB2Q03252 620 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 TMEM35BQ8NCS4 154 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 MCPH1Q8NEM0 835 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 AGR3Q8TD06 166 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 GMCL1Q96IK5 515 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 TMEM8AQ9HCN3 771 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 MYH6P13533 1939 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 RBAK-RBAKDNI3L0D1 243 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 ITIH2P19823 946 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 JAK3P52333 1124 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 KCNJ2P63252 427 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 NCOA4Q13772 614 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 ACAD10Q6JQN1 1059 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 EMC1Q8N766 993 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 RIT2Q99578 217 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 OSBPL7Q9BZF2 842 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 JPH1Q9HDC5 661 aaPredicted RBP14.84□□□□□ -0.03
SDC2-201ENST00000302190 WRAP73Q9P2S5 460 aaPredicted RBP14.84□□□□□ -0.03
SDC2-201ENST00000302190 PPARGC1AQ9UBK2 798 aaKnown RBP14.84□□□□□ -0.03
SDC2-201ENST00000302190 PCDHB2Q9Y5E7 798 aa14.84□□□□□ -0.03
SDC2-201ENST00000302190 SHOX2O60902 331 aaPredicted RBP14.83□□□□□ -0.03
SDC2-201ENST00000302190 PSMD10O75832 226 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 ESRRAP11474 423 aaPredicted RBP14.83□□□□□ -0.03
SDC2-201ENST00000302190 GCLCP48506 637 aaPredicted RBP14.83□□□□□ -0.03
SDC2-201ENST00000302190 NME8Q8N427 588 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 RNF149Q8NC42 400 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 VTI1AQ96AJ9 217 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 NUDCD1Q96RS6 583 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 ETAA1Q9NY74 926 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 FBXO40Q9UH90 709 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 ZFP69BQ9UJL9 534 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 VAV3Q9UKW4 847 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 PNMA3Q9UL41 463 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 NAALADL1Q9UQQ1 740 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 MYH1P12882 1939 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.03
SDC2-201ENST00000302190 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.03
SDC2-201ENST00000302190 BANF1O75531 89 aa14.83□□□□□ -0.04
SDC2-201ENST00000302190 HOXD13P35453 343 aa14.83□□□□□ -0.04
SDC2-201ENST00000302190 DRP2Q13474 957 aa14.83□□□□□ -0.04
SDC2-201ENST00000302190 ZNF699Q32M78 642 aa14.83□□□□□ -0.04
SDC2-201ENST00000302190 MOXD1Q6UVY6 613 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms