RNA–Protein interactions for RNA: ENST00000301305.7

SLC39A4-202, Transcript of solute carrier family 39 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A4, Length 2,174 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A4-202ENST00000301305 HLA-DRAP01903 254 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 C4BPAP04003 597 aaKnown RBP23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 MYCLP12524 364 aaPredicted RBP23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 KCNJ2P63252 427 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 MAMLD1Q13495 774 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 FITM2Q8N6M3 262 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 BICD1Q96G01 975 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 ANKRD27Q96NW4 1050 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 PI4K2AQ9BTU6 479 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 PITPNM3Q9BZ71 974 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 BATF3Q9NR55 127 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 PARVAQ9NVD7 372 aa23.57■■□□□ 1.36
SLC39A4-202ENST00000301305 ACO1P21399 889 aaKnown RBP23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 SPDYAQ5MJ70 313 aa23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 GSTA5Q7RTV2 222 aa23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 ZNF516Q92618 1163 aa23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 PHACTR1Q9C0D0 580 aa23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 ZNF219Q9P2Y4 722 aaPredicted RBP23.56■■□□□ 1.36
SLC39A4-202ENST00000301305 ZBED4O75132 1171 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 CCND2P30279 289 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 GBP2P32456 591 aaPredicted RBP23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 PTPN7P35236 360 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 PIK3CAP42336 1068 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 EAPPQ56P03 285 aaPredicted RBP23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 ARHGEF16Q5VV41 709 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 TRABD2AQ86V40 505 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 FEZF2Q8TBJ5 459 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 HEMGNQ9BXL5 484 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 RAVER2Q9HCJ3 691 aaKnown RBP23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 C15orf41Q9Y2V0 281 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 TJP3O95049 919 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 LDHAP00338 332 aaKnown RBP23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 GH1P01241 217 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 PSAPP07602 524 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 CETPP11597 493 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 MSH2P43246 934 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 CUL2Q13617 745 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 SPARCL1Q14515 664 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 SETDB1Q15047 1291 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 LLGL1Q15334 1064 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 CPXCR1Q8N123 301 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 MAB21L3Q8N8X9 362 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 TBC1D31Q96DN5 1066 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 TMEM39BQ9GZU3 492 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 DONSONQ9NYP3 566 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 PGAP2Q9UHJ9 254 aa23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 CTDP1Q9Y5B0 961 aaPredicted RBP23.55■■□□□ 1.36
SLC39A4-202ENST00000301305 EXOC1LA0A1B0GW35 172 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 LIASO43766 372 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 UNC5CO95185 931 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 STBD1O95210 358 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 ASMTLO95671 621 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 LIG4P49917 911 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 YARSP54577 528 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TAS2R40P59535 323 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 ATP11AP98196 1134 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 NFX1Q12986 1120 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 MORF4L2Q15014 288 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 CCDC142Q17RM4 750 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 PARP6Q2NL67 630 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 P3H1Q32P28 736 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 SLFN12LQ6IEE8 588 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 CGB2Q6NT52 195 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 DNAJC17Q9NVM6 304 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TLR3O15455 904 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 PIGRP01833 764 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 GNA15P30679 374 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 VPS41P49754 854 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TBC1D10BQ4KMP7 808 aaPredicted RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TMEM63BQ5T3F8 832 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 AGAP11Q8TF27 550 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 C9orf72Q96LT7 481 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 C11orf70Q9BRQ4 267 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 SSU72Q9NP77 194 aaKnown RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 GABBR1Q9UBS5 961 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 FETUBQ9UGM5 382 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TBK1Q9UHD2 729 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 SLC24A2Q9UI40 661 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 USH1CQ9Y6N9 552 aa23.54■■□□□ 1.36
SLC39A4-202ENST00000301305 TESPA1A2RU30 521 aaPredicted RBP23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 ATP2A1O14983 1001 aa23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 TNNI1P19237 187 aa23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 SF3A3Q12874 501 aaKnown RBP eCLIP23.53■■□□□ 1.361e-8■■■■□ 22.7
SLC39A4-202ENST00000301305 TMED2Q15363 201 aa23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 VSIG10LQ86VR7 867 aa23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 DENND1AQ8TEH3 1009 aa23.53■■□□□ 1.36
SLC39A4-202ENST00000301305 DCTN3O75935 186 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 ANP32DO95626 131 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 ALDH3A1P30838 453 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 DSG3P32926 999 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 POLGP54098 1239 aaPredicted RBP23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 TAP1Q03518 808 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 PDE4CQ08493 712 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 ZKSCAN8Q15776 578 aaPredicted RBP23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 CDHR1Q96JP9 859 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 RMDN2Q96LZ7 410 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 MLXIPLQ9NP71 852 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 SHOC2Q9UQ13 582 aa23.52■■□□□ 1.36
SLC39A4-202ENST00000301305 PCDHB4Q9Y5E5 795 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms