RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 PAPOLBQ9NRJ5 636 aaKnown RBP11.81□□□□□ -0.52
GCN1-201ENST00000300648 USE1Q9NZ43 259 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 HPS5Q9UPZ3 1129 aa11.81□□□□□ -0.52
GCN1-201ENST00000300648 HOXC6P09630 235 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 GRAPQ13588 217 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 C6orf10Q5SRN2 563 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 GRAPLQ8TC17 118 aaPredicted RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 C11orf70Q9BRQ4 267 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 BBS2Q9BXC9 721 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 C20orf96Q9NUD7 363 aaPredicted RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 ARHGEF38Q9NXL2 777 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 SFMBT1Q9UHJ3 866 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 DLC1Q96QB1 1528 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 ZNF521Q96K83 1311 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 ACADSBP45954 432 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 PCNX4Q63HM2 1172 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 SH3KBP1Q96B97 665 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 TMA16Q96EY4 203 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 H0YC42 278 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 UBXN8O00124 270 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 RNF103O00237 685 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 SERPINH1P50454 418 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 GEMIN4P57678 1058 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 PTK7Q13308 1070 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 FAM83EQ2M2I3 478 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 ARMCX6Q7L4S7 300 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 RTL3Q8N8U3 475 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 PGBD4Q96DM1 585 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 VCPKMTQ9H867 229 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 TLR7Q9NYK1 1049 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 STARD13Q9Y3M8 1113 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 FGFR4P22455 802 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 NCALDP61601 193 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 KLHL12Q53G59 568 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 NLRP4Q96MN2 994 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 TTC7AQ9ULT0 858 aaPredicted RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 ARIH1Q9Y4X5 557 aaPredicted RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 TMEM120BA0PK00 339 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 EPS8Q12929 822 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 NAB2Q15742 525 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 C11orf88Q6PI97 169 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 KRT73Q86Y46 540 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 COPG2Q9UBF2 871 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 GDAQ9Y2T3 454 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 TMEM94Q12767 1356 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 PDS5AQ29RF7 1337 aaKnown RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 RGS2P41220 211 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 TPI1P60174 286 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 PSMC5P62195 406 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 GRM4Q14833 912 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 CACHD1Q5VU97 1274 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 CATSPER4Q7RTX7 472 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 FLCNQ8NFG4 579 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 GREM2Q9H772 168 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 AP3M1Q9Y2T2 418 aa11.8□□□□□ -0.52
GCN1-201ENST00000300648 KDM6AO15550 1401 aaPredicted RBP11.8□□□□□ -0.52
GCN1-201ENST00000300648 ENO4A6NNW6 628 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 ATP1A1P05023 1023 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 MUTP22033 750 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 VSNL1P62760 191 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 GTF2H3Q13889 308 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 ARMC3Q5W041 872 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 XRRA1Q6P2D8 792 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 TRIM65Q6PJ69 517 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 CLMNQ96JQ2 1002 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 WHRNQ9P202 907 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 CYB5D1Q6P9G0 228 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 BTN2A1Q7KYR7 527 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 SFR1Q86XK3 245 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 FAM45AQ8TCE6 357 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 ERP44Q9BS26 406 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 MKNK1Q9BUB5 465 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 SLC40A1Q9NP59 571 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 MAP3K20Q9NYL2 800 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 PRPF4O43172 522 aaKnown RBP eCLIP11.79□□□□□ -0.524e-6■■■□□ 15.6
GCN1-201ENST00000300648 THRAP10827 490 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 HOXB6P17509 224 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 FDFT1P37268 417 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 PTGISQ16647 500 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 QKIQ96PU8 341 aaKnown RBP eCLIP11.79□□□□□ -0.522e-36■■■■■ 160.4
GCN1-201ENST00000300648 HEMGNQ9BXL5 484 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 XPO7Q9UIA9 1087 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 BAZ2BQ9UIF8 2168 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 LRRC24Q50LG9 513 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 ATPAF2Q8N5M1 289 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 RASGRP4Q8TDF6 673 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 ZNF483Q8TF39 744 aaPredicted RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 ILKAPQ9H0C8 392 aaPredicted RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 TJP2Q9UDY2 1190 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 LRCH1Q9Y2L9 728 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 P4HBP07237 508 aaKnown RBP11.79□□□□□ -0.52
GCN1-201ENST00000300648 RRM2P31350 389 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 GCLMP48507 274 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 IRAK1P51617 712 aa11.79□□□□□ -0.52
GCN1-201ENST00000300648 TAF2Q6P1X5 1199 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms